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The vacuolar sorting protein Vps45 links iron uptake, mitochondrial function and virulence in the pathogenic fungus Cryptococcus neoformans.

2018· preprint· en· W4214805697 on OpenAlexaff
Mélissa Caza

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldMedicine
TopicFungal Infections and Studies
Canadian institutionsUniversity of British ColumbiaCanada's Michael Smith Genome Sciences Centre
Fundersnot available
KeywordsCryptococcus neoformansVirulenceFungusMicrobiologyPathogenic fungusBiologySortingGeneBiochemistryBotanyComputer science

Abstract

fetched live from OpenAlex

Objectives: Cryptococcus neoformans is the main causative agent of cryptococcal meningitis, a disease that is responsible for ~ 15% of AIDS-related deaths. In this regard, cryptococosis is the second most common cause of mortality in people with HIV/AIDS. Unfortunately, very few antifungal drugs are available to treat cryptococcal infections. However, understanding the mechanisms of C. neoformans pathogenesis may lead to new therapeutic approaches. The competition for iron between invading microorganisms and mammalian hosts is a pivotal determinant of the outcome of infection, and C. neoformans employs multiple mechanisms to compete for iron during cryptococcosis. In this study, our goal was to examine the role of endocytic trafficking in iron uptake by characterizing a mutant defective in the Sec1/Munc18 (SM) protein Vps45. This protein is known to regulate the machinery for vesicle trafficking and fusion via interactions with SNARE proteins. Methods: Cellular localizations were performed using fluorescence microscopy on Vps45-GFP and Cfo1-GFP strains stained with FM4-64 and MitoTracker Red CMXRos. Growth curves and growth assays on the WT strain, vps45 mutants and complemented strains were performed in the presence of trafficking inhibitors, different iron sources, calcium chelators, mitochondria electron transport chain inhibitors, inducers of reactive oxygen species (ROS), cell wall stressors, and antifungal and antimalarial drugs. Flow cytometry was used to assess ROS stress, mitochondrial membrane permeability and cell wall integrity. Virulence assays were performed in the murine macrophage-like cell line J774A.1 and in an inhalation mouse model of cryptococcosis. Results: As expected, a vps45 deletion mutant was impaired in endocytosis and showed sensitivity to trafficking inhibitors. The mutant also showed poor growth on iron-limited media and a defect in transporting the Cfo1 ferroxidase of the high-affinity iron uptake system from the plasma membrane to the vacuole. Remarkably, we made the novel observation that Vps45 also contributes to mitochondrial function in that a Vps45-Gfp fusion protein co-localized with mitotracker, and a vps45 mutant showed enhanced sensitivity to inhibitors of electron transport complexes. Consistent with mitochondrial function, the vps45 mutant was impaired in calcium homeostasis. To assess the relevance of these defects for virulence, we examined cell surface properties of the vps45 mutant and found increased sensitivity to agents that challenge cell wall integrity and antifungal drugs. A change in cell wall properties was consistent with our observation of altered capsule polysaccharide attachment, and with attenuated virulence in a mouse model of cryptococcosis. Conclusion: These discoveries shed light on the molecular mechanisms underlying the uptake and use of iron as an essential nutrient for the virulence of C. neoformans. Further investigations could lead to the development of antifungal drugs that target Vps45-mediated processes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.269
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2018
Admission routes1
Has abstractyes

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