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Record W4220674985 · doi:10.1117/12.2626470

Detection of Legionella pneumophila with antimicrobial peptide-based GaAs/AlGaAs biosensor

2022· preprint· en· W4220674985 on OpenAlexaff
Muhammad Amirul Islam, Walid M. Hassen, Azam F. Tayabali, Jan J. Dubowski

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
Topicbioluminescence and chemiluminescence research
Canadian institutionsHealth CanadaInstitut interdisciplinaire d'innovation technologiqueUniversité de Sherbrooke
Fundersnot available
KeywordsBiosensorLegionella pneumophilaBiochipMagaininFourier transform infrared spectroscopyMelittinPeptideInfrared spectroscopyAbsorbanceChemistryMaterials scienceSpectroscopyAntimicrobial peptidesNanotechnologyAnalytical Chemistry (journal)BacteriaChromatographyBiochemistryOrganic chemistryOpticsBiologyPhysics

Abstract

fetched live from OpenAlex

Biosensor-based detection of pathogenic bacteria has gained attention since it could be fast, portable, cost effective and potentially easy to use. In this study, we investigated the detection of L. pneumophila using an antimicrobial peptide (AMP) and antibody (Ab) functionalized GaAs/AlGaAs biochips. The AMP attachment on GaAs surface was evaluated using Fourier-transform infrared spectroscopy (FTIR) and atomic force microscopy (AFM). The peptide-related absorbance bands in IR (1588 cm-1, 1653 cm-1, and 1734 cm-1) suggest the successful immobilization of AMP on GaAs. The bacterial capture efficiency/affinity on GaAs surface was evaluated for several peptides such as warnericin RK, clavanin, parasin, magainin, melittin and it was observed that the warnericin RK obtained ~4 times higher capture efficiency compared to the other peptides. We successfully detected L. pneumophila using AMP, as well as Ab conjugated GaAs/AlGaAs biosensors. The AMP functionalized biosensors, however, allowed higher sensitivity compared to Ab based bioarchitecture. The proposed AMP functionalized GaAs/AlGaAs biosensor is attractive for rapid and sensitive detection of L. pneumophila in water samples.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.254
Teacher spread0.240 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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