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Record W4220934075 · doi:10.1101/2022.03.21.484899

Dissociable Cellular and Genetic Mechanisms of Cortical Thinning at Different Life Stages

2022· preprint· en· W4220934075 on OpenAlexaff
Amirhossein Modabbernia, Didac Vidal‐Piñeiro, Ingrid Agartz, Ole A. Andreassen, Rosa Ayesa‐Arriola, Alessandro Bertolino, Dorret I. Boomsma, Josiane Bourque, Alan Breier, Henry Brodaty, Rachel M. Brouwer, Jan K. Buitelaar, Erick J. Canales‐Rodríguez, Xavier Caseras, Patricia Conrod, Benedicto Crespo‐Facorro, Fabrice Crivello, Eveline A. Crone, Greig I. de Zubicaray, Erin W. Dickie, Danai Dima, Stefan Frenzel, Simon E. Fisher, Barbara Franke, David C. Glahn, Hans J. Grabe, Dominik Grotegerd, Oliver Gruber, Amalia Guerrero‐Pedraza, Raquel E. Gur, Ruben C. Gur, Catharina A. Hartman, Pieter J. Hoekstra, Hilleke E. Hulshoff Pol, Neda Jahanshad, Terry L. Jernigan, Jiyang Jiang, Andrew Kalnin, Nicole A. Kochan, Bernard Mazoyer, Brenna C. McDonald, Katie L. McMahon, Lars Nyberg, Jaap Oosterlaan, Edith Pomarol‐Clotet, Joaquim Raduà, Perminder S. Sachdev, Theodore D. Satterthwaite, Raymond Salvador, Salvador Sarró, Andrew J. Saykin, Günter Schumann, Jordan W. Smoller, I. Sommer, Thomas Espeseth, Sophia I. Thomopoulos, Julian N. Trollor, Dennis van ‘t Ent, Aristotle N. Voineskos, Yang Wang, Bernd Weber, Lars T. Westlye, Heather C. Whalley, Steven Williams, Katharina Wittfeld, Margaret J. Wright, Paul M. Thompson, Thomas Paus, Sophia Frangou

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2022
Typepreprint
Languageen
FieldNeuroscience
TopicNeuroinflammation and Neurodegeneration Mechanisms
Canadian institutionsUniversity of British ColumbiaUniversity of TorontoCentre Hospitalier Universitaire Sainte-JustineCentre for Addiction and Mental HealthUniversité de Montréal
FundersNational Institute of Mental HealthMedical Research CouncilNational Institutes of HealthRadboud Universitair Medisch CentrumFundación Marqués de ValdecillaNederlandse Organisatie voor Wetenschappelijk OnderzoekMax Planck Instituut voor PsycholinguïstiekVrije Universiteit AmsterdamUniversitair Medisch Centrum GroningenInstituto de Salud Carlos IIISimons Foundation Autism Research InitiativeZonMwNorges ForskningsrådEuropean Federation of Pharmaceutical Industries and AssociationsAutism SpeaksRadboud UniversiteitAccareEuropean Commission
KeywordsNeuroscienceMicrogliaNeuroimagingBiologyNeurodegenerationHuman brainBrain agingPsychologyMedicineDiseasePathologyCognitionInflammation

Abstract

fetched live from OpenAlex

Abstract Mechanisms underpinning age-related variations in cortical thickness in the human brain remain poorly understood. We investigated whether inter-regional age-related variations in cortical thinning (in a multicohort neuroimaging dataset from the ENIGMA Lifespan Working Group totalling 14,248 individuals, aged 4-89 years) depended on cell-specific marker gene expression levels. We found differences amidst early-life (<20 years), mid-life (20-60 years), and late-life (>60 years) in the patterns of association between inter-regional profiles of cortical thickness and expression profiles of marker genes for CA1 and S1 pyramidal cells, astrocytes, and microglia. Gene ontology and enrichment analyses indicated that each of the three life-stages was associated with different biological processes and cellular components: synaptic modeling in early life, neurotransmission in mid-life, and neurodegeneration in late-life. These findings provide mechanistic insights into age-related cortical thinning during typical development and aging.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.223
Teacher spread0.201 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicNeuroinflammation and Neurodegeneration Mechanisms→French-language works237,207→