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Record W4220942849 · doi:10.1139/facets-2021-0180

Macrofungal conservation in Canada and target species for assessment: a starting point

2022· article· en· W4220942849 on OpenAlexafffundvenueabout
Anna Bazzicalupo, Susana C. Gonçalves, Rémi Hébert, Sigrid Jakob, Alfredo Justo, Gavin Kernaghan, Renée Lebeuf, Bruce Malloch, R. Greg Thorn, Allison K. Walker

Bibliographic record

VenueFACETS · 2022
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMycorrhizal Fungi and Plant Interactions
Canadian institutionsAcadia UniversityWestern UniversityGovernment of CanadaMount Saint Vincent UniversityUniversity of New BrunswickEnvironment and Climate Change CanadaUniversity of British Columbia
FundersAgriculture and Agri-Food CanadaNatural Sciences and Engineering Research Council of Canada
KeywordsBiodiversityDisseminationCitizen scienceDistribution (mathematics)AmateurAbundance (ecology)HabitatWork (physics)Environmental resource managementGovernment (linguistics)EcologyConservation biologyBiodiversity conservationEnvironmental planningGeographyBiologyPolitical scienceEnvironmental scienceEngineering

Abstract

fetched live from OpenAlex

Despite the ecological importance of fungi, we still know little about their diversity in Canada. One of the largest hurdles to implementing fungal conservation initiatives is the lack of fungal distribution data. As anthropogenic impacts accelerate the speed of environmental change, it is imperative that we fill this major information gap, critical for fungal protection. To gain insight on the conservation status of Canadian macrofungi, we took advantage of the large and growing body of fungal biodiversity data from government research ( Wild Species 2020), citizen science, trained independent mycologists, university, and museum biodiversity research. The majority of macrofungi are data deficient; we do not know their geographic distribution or habitat requirements, occurrence, or abundance in Canada. For mushrooms that fruit only a few days of the year and are often difficult to positively identify, there is a lot of work to overcome the uncertainty of distinguishing under-sampling from rarity. Our work stresses the importance of building a strong network of professional and amateur mycologists to develop resources, disseminate information to make educated decisions, and advance conservation actions. We found that several fungi can be prioritized; we present a short list for consideration for formal conservation assessment.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.083
Threshold uncertainty score0.606

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.008
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0070.007
Science and technology studies0.0140.003
Scholarly communication0.0080.004
Open science0.0030.004
Research integrity0.0020.004
Insufficient payload (model declined to judge)0.0090.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.214
Teacher spread0.195 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations17
Published2022
Admission routes4
Has abstractyes

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