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Record W4225109837 · doi:10.1002/mrm.29249

Comparison of multicenter <scp>MRI</scp> protocols for visualizing the spinal cord gray matter

2022· article· en· W4225109837 on OpenAlexafffund
Julien Cohen‐Adad, Eva Alonso‐Ortiz, Stephanie Alley, Maria Marcella Laganà, Francesca Baglio, S. Johanna Vannesjo, Haleh Karbasforoushan, Maryam Seif, Alan C. Seifert, Junqian Xu, Joo-won Kim, René Labounek, Ľubomír Vojtíšek, Marek Dostál, Jan Valošek, Rebecca S. Samson, Francesco Grussu, Marco Battiston, Claudia A. M. Gandini Wheeler‐Kingshott, Marios Yiannakas, Guillaume Gilbert, Torben Schneider, Brian Johnson, Ferrán Prados

Bibliographic record

VenueMagnetic Resonance in Medicine · 2022
Typearticle
Languageen
FieldMedicine
TopicAdvanced MRI Techniques and Applications
Canadian institutionsPhilips (Canada)Université de MontréalPolytechnique MontréalMila - Quebec Artificial Intelligence Institute
FundersFonds de Recherche du Québec-Société et CultureCanada First Research Excellence FundEngineering and Physical Sciences Research CouncilCanadian Institutes of Health ResearchNational Institute of Neurological Disorders and StrokeNational Institute for Health and Care ResearchUniversity College London Hospitals NHS Foundation TrustAgentura Pro Zdravotnický Výzkum České RepublikyCentro Singular de Investigación de GaliciaMinisterstvo Zdravotnictví Ceské RepublikyNatural Sciences and Engineering Research Council of CanadaCanada Foundation for Innovation
KeywordsSpinal cordWhite matterImage qualityComputer scienceGray (unit)Magnetic resonance imagingMedicineArtificial intelligenceNuclear medicinePattern recognition (psychology)Radiology

Abstract

fetched live from OpenAlex

PURPOSE: Spinal cord gray-matter imaging is valuable for a number of applications, but remains challenging. The purpose of this work was to compare various MRI protocols at 1.5 T, 3 T, and 7 T for visualizing the gray matter. METHODS: In vivo data of the cervical spinal cord were collected from nine different imaging centers. Data processing consisted of automatically segmenting the spinal cord and its gray matter and co-registering back-to-back scans. We computed the SNR using two methods (SNR_single using a single scan and SNR_diff using the difference between back-to-back scans) and the white/gray matter contrast-to-noise ratio per unit time. Synthetic phantom data were generated to evaluate the metrics performance. Experienced radiologists qualitatively scored the images. We ran the same processing on an open-access multicenter data set of the spinal cord MRI (N = 267 participants). RESULTS: Qualitative assessments indicated comparable image quality for 3T and 7T scans. Spatial resolution was higher at higher field strength, and image quality at 1.5 T was found to be moderate to low. The proposed quantitative metrics were found to be robust to underlying changes to the SNR and contrast; however, the SNR_single method lacked accuracy when there were excessive partial-volume effects. CONCLUSION: We propose quality assessment criteria and metrics for gray-matter visualization and apply them to different protocols. The proposed criteria and metrics, the analyzed protocols, and our open-source code can serve as a benchmark for future optimization of spinal cord gray-matter imaging protocols.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.011
metaresearch head score (Gemma)0.023
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.061

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0110.023
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.064
GPT teacher head0.449
Teacher spread0.385 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations11
Published2022
Admission routes2
Has abstractyes

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