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The effect of disease‐causing <i>DVL1</i> mutations on chondrogenesis in chicken limb mesenchyme

2022· article· en· W4225396984 on OpenAlexafffund
Kywana Bonaparte, Joy M. Richman

Bibliographic record

VenueThe FASEB Journal · 2022
Typearticle
Languageen
FieldMedicine
TopicMusculoskeletal synovial abnormalities and treatments
Canadian institutionsUniversity of British Columbia
FundersCanadian Institutes of Health Research
KeywordsMesenchymeChondrogenesisDiseaseMutationMedicineBiologyChemistryCell biologyInternal medicineGeneticsGene

Abstract

fetched live from OpenAlex

The Wingless (WNT) signaling pathway is a key regulator of skeletal development. Perturbations in WNT signaling are associated with several skeletal disorders, including Robinow syndrome (RS). RS is a rare skeletal dysplasia characterized by deficiencies in facial and limb skeletogenesis. All identified pathogenic variants of RS occur in genes of the WNT signaling pathway. The majority of autosomal dominant RS patients (DRS) cases are attributed to mutations in Dishevelled‐1 (DVL1) (OMIM#1807000) and Dishevelled‐3 (DVL3) (OMIM#616894), a cytoplasmic phosphoprotein. All RS DVL1 variants have frameshift mutation in the penultimate exon that substitutes an abnormal peptide for the C‐terminus of the protein. Previous research in our lab has shown the expression of avian‐ specific retroviruses containing human wild‐type DVL1 and RS DVL1 variants in the limb of the chicken embryo in vivo disrupts cartilage formation. In order to examine the possible role of WNT signaling in the dysregulation of chondrogenesis caused by DVL1 , high‐density cultures of chicken limb mesenchyme were treated with DVL1 viruses and either TCS JNK6o, which antagonizes non‐canonical, JNK signaling or XAV939, a canonical pathway antagonist. Cultures were grown for eight‐days stained with Alcian blue for cartilage. The area occupied by cartilage was analyzed using two‐way ANOVA with Tukey’s post‐hoc test (Graphpad Prism v9.3). In the absence of drug treatment, wtDVL1 and RS DVL1 1519 Δ T variant significantly increased chondrogenesis compared to GFP controls (Fig. 1A,B). Cultures treated with TCS6o (Fig. 1A) did not significantly increase cartilage compared to non‐treated controls culture. The combination of wtDVL1 with TCS6o synergistically increased chondrogenesis. This suggests 1) that endogenous non‐canonical WNT signaling is not required for chondrogenesis, 2) that wtDVL1 has a degree of JNK signaling that when antagonized increases chondrogenesis and 3) that the variants are not interacting with JNK signaling. When canonical signaling was antagonized (Fig. 1B), chondrogenesis was significantly increased for all virus types compared to GFP controls. However, the effect of XAV939 on the DVL1 1519 Δ T variant‐infected cultures did not further increase chondrogenesis over the virus alone. This suggest that endogenous canonical WNT signaling represses chondrogenesis and but the variant may have altered ability to respond to a decrease in canonical signaling. Misregulation of canonical and non‐canonical WNT signaling is tied to abnormal chondrogenesis and could be contributing to the shortened limbs observed in RS patients.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.259
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2022
Admission routes2
Has abstractyes

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