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Record W4225713781 · doi:10.1021/acscentsci.1c01002

Routescore: Punching the Ticket to More Efficient Materials Development

2022· article· en· W4225713781 on OpenAlexafffund
Martin Seifrid, Riley J. Hickman, Andrés Aguilar‐Granda, Cyrille Lavigne, Jenya Vestfrid, Tony Wu, Théophile Gaudin, Emily J. Hopkins, Alán Aspuru‐Guzik

Bibliographic record

VenueACS Central Science · 2022
Typearticle
Languageen
FieldMaterials Science
TopicMachine Learning in Materials Science
Canadian institutionsVector InstituteCanadian Institute for Advanced ResearchUniversity of Toronto
FundersNatural Resources CanadaNatural Sciences and Engineering Research Council of CanadaDefense Advanced Research Projects AgencyCanada Research Chairs
KeywordsComputer scienceChemical spaceBottleneckFlexibility (engineering)Synthetic dataThroughputA priori and a posterioriArtificial intelligenceEmbedded systemDrug discoveryBioinformatics

Abstract

fetched live from OpenAlex

High Resolution Image Download MS PowerPoint Slide Self-driving laboratories, in the form of automated experimentation platforms guided by machine learning algorithms, have emerged as a potential solution to the need for accelerated science. While new tools for automated analysis and characterization are being developed at a steady rate, automated synthesis remains the bottleneck in the chemical space accessible to self-driving laboratories. Combining automated and manual synthesis efforts immediately significantly expands the explorable chemical space. To effectively direct the different capabilities of automated (higher throughput and less labor) and manual synthesis (greater chemical versatility), we describe a protocol, the RouteScore, that quantifies the cost of combined synthetic routes. In this work, the RouteScore is used to determine the most efficient synthetic route to a well-known pharmaceutical (structure-oriented optimization) and to simulate a self-driving laboratory that finds the most easily synthesizable organic laser molecule with specific photophysical properties from a space of ∼3500 possible molecules (property-oriented optimization). These two examples demonstrate the power and flexibility of our approach in mixed synthetic planning and optimization and especially in downselecting promising candidates from a large chemical space via an a priori estimation of the synthetic costs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.040
Threshold uncertainty score0.133

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.006
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0020.003
Open science0.0020.002
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0400.015

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.254
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2022
Admission routes2
Has abstractyes

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