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Differential drivers of intraspecific and interspecific competition during malaria-helminth co-infection

2022· preprint· en· W4226333531 on OpenAlexaff
Liana F. Wait, Tsukushi Kamiya, Karen Fairlie‐Clarke, Jessica Metcalf, Andrea L. Graham, Nicole Mideo

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldMedicine
TopicMalaria Research and Control
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsMalariaIntraspecific competitionInterspecific competitionBiologyParasite hostingHost (biology)Competition (biology)ImmunologyHelminthsZoologyEcology

Abstract

fetched live from OpenAlex

Various host and parasite factors interact to determine the outcome of infection. We investigated the effects of initial infectious dose and co-infection with a red blood cell-limiting helminth on the within-host dynamics of murine malaria. Using a time-series approach to model the within-host “epidemiology” of malaria, we found that increasing initial dose reduced time to peak cell-to-cell parasite propagation, but also reduced its magnitude, while helminth co-infection delayed peak malaria propagation, except at the highest malaria doses. Using a mechanistic model of within-host dynamics, we identified dose-dependence in parameters describing host responses to malaria infection and uncovered a plausible explanation of the observed differences during co-infections: in co-infections, our model predicted a higher background death rate of RBCs combined with greater influx of new RBCs. Such interactions are key to understanding variation in disease severity, and could inform field studies of malaria, where co-infection and low doses are the norm.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.279
Teacher spread0.262 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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