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Record W4229065067 · doi:10.26434/chemrxiv-2022-0jqng

Direct imaging of the alternating disordered and crystalline structure of cellulose fibrils via super-resolution fluorescence microscopy

2022· preprint· en· W4229065067 on OpenAlexafffund
Mouhanad Babi, Anthony Palermo, Tíffany Abitbol, Ayodele Fatona, Victoria Jarvis, Akanksha Nayak, Emily D. Cranston, Jose Moran‐Mirabal

Bibliographic record

VenueChemRxiv · 2022
Typepreprint
Languageen
FieldMaterials Science
TopicAdvanced Cellulose Research Studies
Canadian institutionsUniversity of British ColumbiaMcMaster University
FundersNatural Sciences and Engineering Research Council of CanadaCanada Research ChairsCanada Foundation for Innovation
KeywordsCelluloseFibrilCrystallinityNanoscopic scaleBacterial celluloseMaterials scienceAmorphous solidChemical engineeringCrystallographyHydrolysisChemistryNanotechnologyOrganic chemistryBiochemistry

Abstract

fetched live from OpenAlex

Cellulose, the primary component of the plant cell wall, has fueled the wood, textile, pulp and paper industries for centuries, and has recently been used for the production of renewable nanomaterials. The tight crystalline packing of glucan chains within cellulose fibrils is responsible for its superior mechanical properties but renders this material recalcitrant to biochemical and chemical breakdown and limits its use as a green resource. The presence of nanoscale dislocations within cellulose fibrils has been postulated for decades and is thought to be responsible for the production and size of cellulose nanocrystals (CNCs) following acid hydrolysis. However, dislocations have never been directly visualized and their prevalence and size have remained elusive. In this study, we have used super-resolution (SR) fluorescence microscopy to directly visualize and measure alternating crystalline and disordered regions within individual fluorescently labelled bacterial cellulose fibrils. The measured size of the crystalline regions ranges from 40 – 400 nm and shows striking overlap with the length distribution of bacterial CNCs produced through sulfuric acid hydrolysis, supporting the fringed micellar model for the supramolecular structure of cellulose fibrils. The disordered regions were found to be 20 – 120 nm in length and show heterogeneous accessibility, which directs fibril cleavage during the initial stages of cellulose acid hydrolysis. Two-colour SR imaging of cellulose fibrils and bound exoglucanases (Cel7A), in combination with degree of crystallinity measurements suggest that these dislocations are nanoscale in size, and do not result in amorphous cellulose pockets large enough to accommodate enhanced enzyme binding. Through characterization of disordered regions in cellulose fibrils, we have gained insight into the role of cellulose nanostructure in its breakdown by chemical and enzymatic means.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.988

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.004
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.281
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2022
Admission routes2
Has abstractyes

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