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Record W4231729536 · doi:10.26434/chemrxiv.13270469

Vibrational Excitation Initiates Biomimetic Charge-Coupled Motions in the Electronic Ground State

2020· preprint· en· W4231729536 on OpenAlexaff
Gourab Chatterjee, Ajay Jha, Alejandro Blanco-González, Vandana Tiwari, Madushanka Manathunga, Hong-Guang Duan, Friedjof Tellkamp, Valentyn I. Prokhorenko, Nicolas Ferré, Jyotishman Dasgupta, Massimo Olivucci, R. J. Dwayne Miller

Bibliographic record

VenueChemRxiv · 2020
Typepreprint
Languageen
FieldNeuroscience
TopicPhotoreceptor and optogenetics research
Canadian institutionsUniversity of Toronto
FundersDivision of ChemistryBanca d'ItaliaMinistero dell’Istruzione, dell’Università e della RicercaTata Institute of Fundamental ResearchUniversität HamburgMax-Planck-GesellschaftNational Science Foundation
KeywordsChemistryGround stateIsomerizationChemical physicsMoleculeAb initioExcitationCharge (physics)Electronic structureComputational chemistryPhotochemistryAtomic physicsPhysicsCatalysis

Abstract

fetched live from OpenAlex

The concerted interplay between reactive nuclear and electronic motions in molecules actuates chemistry. Manipulating reaction pathways to achieve product selectivity via precise control of light-molecule interactions has allured chemists for decades. Yet it remains an elusive challenge in the electronic ground state, where conventional thermally-driven chemistry occurs. Here, we demonstrate that ground-state vibrational excitation of localised bridge modes initiates charge transfer in a donor-bridge-acceptor molecule in solution. The vibrationally-induced change in the ground-state electronic configuration is visualised by transient absorption spectroscopy, involving a mid-infrared pump and a visible probe, and detailed ab initio molecular dynamics simulations. Mapping the potential energy landscape unravels a hitherto undocumented charge-transfer-assisted double-bond isomerization channel in the electronic ground state. The reaction pathway bears remarkable parallels with the thermal isomerization process in rhodopsin, the retinal protein responsible for scotopic vision. Our results illustrate a generic protocol for activating key vibrational modes to drive photo-triggered ground-state reactions and motivate synthetic and catalytic strategies to achieving potentially new chemistry.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0040.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.091
GPT teacher head0.334
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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