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Record W4231788544 · doi:10.1038/labinvest.2015.5

Breast Pathology

2015· article· en· W4231788544 on OpenAlexaff
Chang‐Tsu Yuan, Yung‐Ming Jeng, Sheng-Yao Su, Cher‐Wei Liang, Chung‐Yen Lin, Shu‐Hwa Chen, Cheng‐Han Lee, Jodi M. Carter, Chen‐Tu Wu, Andrew L. Folpe, Jen‐Chieh Lee, Riyam Zreik, Xiaoke Wang, Jorge Torres‐Mora, Karen Fritchie, André M. Oliveira, William R. Sukov, Wolfgang Ahrens, Elizabeth A. Montgomery, Sharon W. Weiss, Tarek M.A. Abdel-Fatah, Dongxu Iu, Devika Agarwal, Paul M. Moseley, Andrew R. Green, Ian O. Ellis, Graham Ball, Eman Abdelzaher

Bibliographic record

VenueLaboratory Investigation · 2015
Typearticle
Languageen
FieldMedicine
TopicBreast Lesions and Carcinomas
Canadian institutionsRoyal Alexandra HospitalUniversity of Alberta
Fundersnot available
KeywordsPathologyMedicine

Abstract

fetched live from OpenAlex

Conclusions: Our data further demonstrate the complex genetics associated with leiomyosarcomas.As a class, tumor suppressor genes were the most commonly mutated loci, including TP53, mutated in 36% of cases (9/25).The loss of key tumor suppressor genes is consistent with our observations that CNV was present in 85% of leiomyosarcomas.While no common therapeutically targetable gene was identified across these cases, future large cohort sequencing studies of leiomyosarcomas may provide a means for the molecular classification of these tumors and identify new treatment paradigms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.121
Threshold uncertainty score0.404

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.1210.074

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.252
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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