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Record W4231997158 · doi:10.1373/clinchem.2016.263566

Commentary

2016· letter· en· W4231997158 on OpenAlexfundno aff
D. Robert Dufour

Bibliographic record

VenueClinical Chemistry · 2016
Typeletter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMetabolism and Genetic Disorders
Canadian institutionsnot available
FundersCalgary Laboratory Services
KeywordsMedicine

Abstract

fetched live from OpenAlex

The case described by Orton et al. is of a young girl who presented with nonspecific complaints of headache and fatigue. One possible explanation for such symptoms is an inborn error in urea cycle enzymes, a group of rare disorders that more commonly presents acutely and in early childhood (1). Less commonly, chronic presentations with nonspecific symptoms can occur later in life (sometimes even in adults) and can be difficult to diagnose. Most cases also have various neuropsychiatric symptoms in addition to headache and fatigue, and the lack of these being described in this child make this diagnosis less likely. Plasma ammonia concentrations are the most common screening test for this condition, as well as for the similar hepatic encephalopathy that occurs in adults (2). An experienced clinician often recognizes that laboratory results are inconsistent with the clinical picture, as happened in this case. Despite another clinician contacting the laboratory about apparently incorrect ammonia concentrations, it took a second inquiry from the clinicians caring for this child for the laboratory to complete a full investigation, leading to further complications of treatment in the patient and, presumably, large medical bills.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.026
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.984
Threshold uncertainty score0.000

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.026
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0030.003
Scholarly communication0.0040.004
Open science0.0030.002
Research integrity0.0450.037
Insufficient payload (model declined to judge)0.0160.017

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.319
Teacher spread0.297 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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