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Record W4232765080 · doi:10.7287/peerj.preprints.2596

Endocrine disruption: where have we been, interpretation of data, and lessons learned from Tier 1

2016· preprint· en· W4232765080 on OpenAlexaff
Jane Staveley, Leslie W. Touart, Keith R. Solomon, Ellen Mihaich, Amy Blankinship, Gerald T. Ankley

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldEnvironmental Science
TopicEffects and risks of endocrine disrupting chemicals
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsTier 1 networkEndocrine systemEndocrine disruptorTier 2 networkComputational biologyComputer sciencePsychologyBiologyHormoneEndocrinologyWorld Wide Web

Abstract

fetched live from OpenAlex

In response to the requirements of the US EPA’s Endocrine Disruptor Screening Program, Tier 1 assays have been performed with a number of pesticides over the past several years. These assays are designed to be used in concert as a screen for potential interactions with vertebrate estrogen, androgen, and thyroid systems. The results of the 11 assays in the Tier 1 battery are then used, along with other lines of evidence, to determine whether a chemical is endocrine-active and, as a consequence, might be a candidate for Tier 2 testing. An overview of the Tier-1 testing program was presented in Session Two of the Society of Environmental Toxicology and Chemistry (SETAC) North America Focused Topic Meeting: Endocrine Disruption Chemical Testing: Risk Assessment Approaches and Implications (February 4 – 6, 2014). Subsequent presentations discussed the concept of weight-of-evidence (WoE) and assessment of Tier 1 results in a WoE framework. The importance of scientifically credible, transparent approaches for conducting WoE analyses was recognized, and approaches for framing the hypotheses, evaluating the data, assigning weight to different endpoints relative to their diagnostic effectiveness, and assessing confounding factors were presented. In recognition of the cross-species conservation of the hypothalamic-pituitary-gonadal axis among vertebrates, a subset of the Tier-1 in vivo assays may be useful for more rapidly screening chemicals for potential endocrine activity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.132
metaresearch head score (Gemma)0.129
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.132
Threshold uncertainty score0.699

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1320.129
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0030.002
Bibliometrics0.0040.005
Science and technology studies0.0030.019
Scholarly communication0.0250.027
Open science0.0040.006
Research integrity0.0060.018
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.044
GPT teacher head0.384
Teacher spread0.340 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSystematic review
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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