MétaCan
Menu
Back to cohort
Record W4234870470 · doi:10.12681/jhvms.15264

Hepatitis E

2017· article· en· W4234870470 on OpenAlexaboutno aff
A SIOCHU

Bibliographic record

VenueJournal of the Hellenic Veterinary Medical Society · 2017
Typearticle
Languageen
FieldMedicine
TopicHepatitis Viruses Studies and Epidemiology
Canadian institutionsnot available
Fundersnot available
KeywordsCaliciviridaeHepatitis E virusHepatitis EGenotypeVirologyORFSViral hepatitisAsymptomaticBiologyViral diseaseMedicineVirusGeneticsInternal medicine

Abstract

fetched live from OpenAlex

HEV is responsible for large epidemics of acute hepatitis and sporadic cases in southeast and central Asia, the Middle East, parts of Africa and Mexico. Few HEV infections have been reported in non-travelers in industrialized countries, including the Netherlands. HEV infection spreads by the fecal-oral route, usually through contaminated water. The clinical illness resembles other forms of acute viral hepatitis, with onset after an incubation period of one to eight weeks. Clinical attack rates are the highest among young adults. In younger age groups, infections are more often anicteric and asymptomatic. Chronic HEV infection has not been observed. Although the death rate is usually low (0.07% to 0.6%), the illness may be particularly severe among pregnant women, with death rates as high as 25%. To date, no specific treatment is available for HEV infection. Ensuring a clean drinking water supply remains the best preventive strategy. HEV is a small, non-enveloped virus that has apositive-sense, single-stranded RNA genome of approximately 7.2 Kb. The genome contains three open reading frames (ORFs). In general, different genotypes circulate within different geographical areas, (genotype 1: Southeast and Central Asia, genotype 2: Mexico, genotype 3: USA-US1,US2 , SwUS and genotype 4: China). HEV was initially considered to be a member of the family Caliciviridae. However, on the basis of comparative phylogenetic analysis, it was recendy removed from the Caliciviridae family. In Western Europe and the United States, clinical cases of hepatitis caused by HEV are rare and most often they have been associated with travel to areas, where HEV is endemic. However, novel strains of HEV have been isolated in the US and in Europe from patients without a history of travel to regions endemic for HEV. Serological studies in industrialized countries have shown that the prevalence of anti-HEV antibodies is 1-6% among blood donors and is much higher in some populations. The cause of this relatively high prevalence of anti-HEV in countries, where clinical hepatitis E is rare, is unknown. Balayan et al. first demonstrated that domestic pigs could be experimentally infected with a human HEV isolate. Clayson et al. subsequently detected RNA and antibodies of HEV in pigs in Nepal, but the virus was not characterized. A unique swine HEV was first isolated in 1997. Later studies revealed that swine from other countries, such as Australia, Vietnam, Taiwan, Canada, Spain and Greece, were also infected with HEV. The swine HEV strain isolated from a pig in Illinois is genetically very closely related to two U.S. strains of human HEV. Similarly, the swine HEV strains isolated from pigs in Taiwan are closely related to Taiwanese strains of human HEV. Interspecies transmission of HEV has been experimentally demonstrated: swine HEV infected non-human primates and a strain of human HEV infected pigs. Also, HEV from swine might sometimes be transmitted to humans through environmental contact. These findings implicate a possible transmission of the virus from pigs to humans. These data suggested that HEV infection of humans through contact with pigs may be possible and that swine veterinarians and other pig handlers may be at risk of zoonotic infection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.048
Threshold uncertainty score0.643

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.095
GPT teacher head0.380
Teacher spread0.284 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

Explore more

Same venueJournal of the Hellenic Veterinary Medical SocietySame topicHepatitis Viruses Studies and EpidemiologyFrench-language works237,207