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Record W4237289053 · doi:10.7287/peerj.preprints.544

Estimation of predator-prey mass ratios using stable isotopes: sources of errors

2014· preprint· en· W4237289053 on OpenAlexaff
Eric Hertz, James P. W. Robinson, Marc Trudel, Asit Mazumder, Julia K. Baum

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldEnvironmental Science
TopicIsotope Analysis in Ecology
Canadian institutionsFisheries and Oceans CanadaUniversity of Victoria
Fundersnot available
KeywordsTrophic levelFood webPredationStable isotope ratioPredatorStability (learning theory)Environmental scienceIsotope analysisApex predatorBaseline (sea)Constraint (computer-aided design)StatisticsEcologyMathematicsBiologyFisheryPhysicsComputer science

Abstract

fetched live from OpenAlex

In aquatic systems, the ratio of predator mass to prey mass (PPMR) is an important constraint on food web structure, and has been correlated with environmental stability. One common approach of estimating PPMR uses nitrogen stable isotopes (δ15N) as an indicator of trophic position, under the assumption that the discrimination between diet and tissue is constant with increasing diet δ15N (an additive approach). However, recent studies have shown that this assumption may not be valid, and that there is a negative trend between the δ15N of the diet and the discrimination value (a scaled approach). We estimated PPMR for a simulated food web using the traditional additive approach and improved scaled approach, before testing our predictions with isotope samples from a North Sea food web. Our simulations show that the additive approach gives incorrect estimates of PPMR, and these biases are reflected in North Sea PPMR estimates. The extent of the bias is dependent on the baseline δ15N and trophic level sampled, with the greatest differences for samples with low baseline δ15N sampled at lower trophic levels. The scaled approach allows for the comparison of PPMR across varying δ15N baselines and trophic levels, and will refine estimates of PPMR.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.013
metaresearch head score (Gemma)0.054
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.013
Threshold uncertainty score0.069

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0130.054
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.002
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.260
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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