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The Reactome pathway knowledgebase

2013· article· en· 1,957 citations· W4237335579 on OpenAlex· 10.1093/nar/gkt1102

Why is this work in the frame?

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

Canadian affiliationAn author listed a Canadian institution. This is the only route the usual frame has.

Machine scores (provisional)

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Opus teacher head0.025
GPT teacher head0.300
Teacher spread
0.276 · how far apart the two teachers sit on this one work
Validation status
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Abstract

Reactome (http://www.reactome.org) is a manually curated open-source open-data resource of human pathways and reactions. The current version 46 describes 7088 human proteins (34% of the predicted human proteome), participating in 6744 reactions based on data extracted from 15 107 research publications with PubMed links. The Reactome Web site and analysis tool set have been completely redesigned to increase speed, flexibility and user friendliness. The data model has been extended to support annotation of disease processes due to infectious agents and to mutation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

The record

Venue
Nucleic Acids Research
Topic
Bioinformatics and Genomic Networks
Field
Biochemistry, Genetics and Molecular Biology
Canadian institutions
Ontario Institute for Cancer Research
Funders
National Human Genome Research Institute
Keywords
BiologyAnnotationComputational biologyProteomeHuman proteome projectHuman diseaseComputer scienceBioinformaticsGeneticsProteomicsGene
Has abstract in OpenAlex
yes