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Linear Atomic Cluster Expansion Force Fields for Organic Molecules: beyond RMSE

2021· preprint· en· W4237462218 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldMaterials Science
TopicMachine Learning in Materials Science
Canadian institutionsUniversity of British Columbia
FundersUK Research and InnovationEngineering and Physical Sciences Research CouncilAstraZeneca
KeywordsExtrapolationForce field (fiction)Benchmark (surveying)SmoothnessCluster (spacecraft)Statistical physicsTransferabilityPotential energy surfacePotential energyComputer sciencePhysicsMathematicsMoleculeArtificial intelligenceClassical mechanicsMachine learningQuantum mechanicsMathematical analysis

Abstract

fetched live from OpenAlex

We demonstrate that fast and accurate linear force fields can be built for molecules using the Atomic Cluster Expansion (ACE) framework. The ACE models parametrize the Potential Energy Surface in terms of body ordered symmetric polynomials making the functional form reminiscent of traditional molecular mechanics force fields. We show that the 4 or 5-body ACE force fields improve on the accuracy of the empirical force fields by up to a factor of 10, reaching the accuracy typical of recently proposed machine learning based approaches. We not only show state of the art accuracy and speed on the widely used MD17 and ISO17 benchmark datasets, but also go beyond RMSE by comparing a number of ML and empirical force fields to ACE on more important tasks such as normal mode prediction, high temperature molecular dynamics, dihedral torsional profile prediction and even bond breaking. We also demonstrate the smoothness, transferability and extrapolation capabilities of ACE on a new challenging benchmark dataset comprising a potential energy surface of a flexible drug-like molecule.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.189
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.003
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0070.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.278
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Quick stats

Citations13
Published2021
Admission routes1
Has abstractyes

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