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Record W4238116613 · doi:10.1080/07060660609507335

Physiologic specialization of<i>Puccinia triticina</i>, the causal agent of wheat leaf rust, in Canada in 2004

2006· article· en· W4238116613 on OpenAlexaffvenueabout
Brent McCallum, P. Seto-Goh

Bibliographic record

VenueCanadian Journal of Plant Pathology · 2006
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsVirulenceWheat leaf rustBiologyRust (programming language)PathogenPhenotypePuccinia reconditaPopulationStripe rustGeneMicrobiologyGeneticsPlant disease resistanceMedicine

Abstract

fetched live from OpenAlex

Virulence surveys are conducted annually in Canada on the pathogen causing leaf rust in wheat, Puccinia triticina, to monitor changes in the population and to quickly detect the development of virulence to important resistance genes in wheat. Forty-six virulence phenotypes were identified in 2004 from 330 P. triticina isolates, on the basis of their reactions to 16 wheat differential lines. There were 9 virulence phenotypes among 15 isolates from Quebec and 12 virulence phenotypes among 16 isolates from Ontario. There were 24 virulence phenotypes among 281 isolates from Manitoba and Saskatchewan, where the most frequently isolated were TBBJ (48.0%), TBBG (17.4%), and MBDS (10.0%). Each of the 3 isolates from Alberta possessed a unique virulence phenotype and there were five virulence phenotypes among 15 isolates from British Columbia. Only 3.9% of the isolates collected in 2004 were virulent to Lr16, which constituted a much lower percentage than in previous years. When a subset of 58 representative isolates was tested on adult plants, there were 47, 55, 0, 2, and 46 isolates virulent to the adult-plant resistance genes Lr12, Lr13, Lr34, Lr35, and Lr37, respectively. This subset of isolates varied for virulence on additional differentials tested at the seedling stage, with 30, 41, 18, 39, 26, 1, and 35 isolates virulent to Lr3bg, Lr14b, Lr15, Lr20, Lr23, Lr25, and Lr28, respectively.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.438
Threshold uncertainty score0.246

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.178
Teacher spread0.165 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations67
Published2006
Admission routes3
Has abstractyes

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Same venueCanadian Journal of Plant PathologySame topicWheat and Barley Genetics and PathologyFrench-language works237,207