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Texture analysis of the developing human brain using customization of a knowledge-based system

2017· preprint· en· W4239316177 on OpenAlexaff
Hugues Gentillon, Ludomir Stefańczyk, Michał Strzelecki, Maria Respondek‐Liberska

Bibliographic record

VenueF1000Research · 2017
Typepreprint
Languageen
FieldMedicine
TopicRadiomics and Machine Learning in Medical Imaging
Canadian institutionsUniversity of Alberta
FundersUniwersytet Medyczny w LodziUniwersytet ŁódzkiU.S. Department of Education
KeywordsArtificial intelligencePattern recognition (psychology)Linear discriminant analysisComputer science

Abstract

fetched live from OpenAlex

<ns4:p> <ns4:bold>Background:</ns4:bold> Pattern recognition software originally designed for geospatial and other technical applications could be trained by physicians and used as texture analysis tools for evidence-based practice, in order to improve diagnostic imaging examination during pregnancy. </ns4:p> <ns4:p> <ns4:bold>Methods:</ns4:bold> Various machine-learning techniques and customized datasets were assessed for training of an integrable knowledge-based system (KBS) to determine a hypothetical methodology for texture classification of closely related anatomical structures in fetal brain magnetic resonance (MR) images. Samples were manually categorized according to the magnetic field of the MRI scanner (i.e., 1.5-tesla [1.5T], 3-tesla [3T]), rotational planes (i.e., coronal, sagittal, and axial), and signal weighting (i.e., spin-lattice, spin-spin, relaxation, and proton density). In the machine-learning sessions, the operator manually selected relevant regions of interest (ROI) in 1.5/3T MR images. Semi-automatic procedures in MaZda/B11 were performed to determine optimal parameter sets for ROI classification. Four classes were defined: ventricles, thalamus, gray matter, and white matter. Various texture analysis methods were tested. The KBS performed automatic data preprocessing and semi-automatic classification of ROI. </ns4:p> <ns4:p> <ns4:bold>Results:</ns4:bold> After testing 3456 ROI, statistical binary classification revealed that the combination of reduction techniques with linear discriminant algorithms (LDA) or nonlinear discriminant algorithms (NDA) yielded the best scoring in terms of sensitivity (both 100%, 95% CI: 99.79–100), specificity (both 100%, 95% CI: 99.79–100), and Fisher coefficient (≈E+4 and ≈E+5, respectively). </ns4:p> <ns4:p> <ns4:bold>Conclusions:</ns4:bold> LDA and NDA in MaZda can be useful data mining tools for screening a population of interest subjected to a clinical test. </ns4:p>

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.703
Threshold uncertainty score0.581

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.064
GPT teacher head0.425
Teacher spread0.361 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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