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<i>Thermothrix</i>

2015· other· en· W4241688865 on OpenAlexaff
Anna‐Louise Reysenbach, Paula Fernandes de Aguiar, Douglas E. Caldwell

Bibliographic record

VenueBergey's Manual of Systematics of Archaea and Bacteria · 2015
Typeother
Languageen
FieldAgricultural and Biological Sciences
TopicBiocrusts and Microbial Ecology
Canadian institutionsUniversity of Saskatchewan
Fundersnot available
KeywordsTetrathionateSulfurThiosulfateElectron acceptorOxygenChemistrySulfideBetaproteobacteriaPhotochemistryOrganic chemistryBiochemistry16S ribosomal RNA

Abstract

fetched live from OpenAlex

Abstract Ther'mo.thrix. Gr. adj. thermos hot; Gr. n. thrix hair; N.L. fem. n. Thermothrix hot hair. Rod‐shaped cells , usually 0.5–1.0 × 3–5 µm. Filamentous cells are produced under unfavorable growth conditions such as when grown at temperatures near the maximum temperature, at extreme pH values, or when oxygen limits growth. Motile by means of a single polar flagellum . Gram negative. No spores are produced. Growth occurs between 63–86 ° C and pH 6–8 . 5 . Facultatively or obligately chemolithoautotrophic aerobic . Oxygen or nitrate may be used as the electron acceptor. Electron donors can be organic compounds or inorganic sulfur compounds such as thiosulfate, sulfur, hydrogen sulfide, and tetrathionate. The mol % G + C of the DNA is : 39.7. Type species : Thermothrix thiopara Caldwell, Caldwell and Laycock 1981, 217 (Effective publication: Caldwell, Caldwell and Laycock 1976, 1515.) Taxonomic and Nomenclature Notes According to the List of Prokaryotic names with Standing in Nomenclature (LPSN), the taxonomic status of the genus Thermothrix is: correct name (last update, February 2025) * . LPSN classification: Bacteria / Pseudomonadati / Pseudomonadota / Betaproteobacteria / Burkholderiales / Burkholderiaceae / Thermothrix Thermothrix could not be recovered in GTDB ** . * Meier‐Kolthoff et al. ( 2022 ). Nucleic Acids Res , 50 , D801 – D807 ; DOI: 10.1093/nar/gkab902 ** Parks et al. ( 2022 ). Nucleic Acids Res , 50 , D785 – D794 ; DOI: 10.1093/nar/gkab776

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.182
Threshold uncertainty score0.609

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.1820.094

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.215
Teacher spread0.202 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2015
Admission routes1
Has abstractyes

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