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Record W4241766249 · doi:10.1080/07060660509507199

Physiologic specialization of wheat leaf rust (<i>Puccinia triticina</i>) in Canada in 2002

2005· article· en· W4241766249 on OpenAlexaffvenueabout
Brent McCallum, P. Seto-Goh

Bibliographic record

VenueCanadian Journal of Plant Pathology · 2005
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsVirulenceBiologyPhenotypeWheat leaf rustGeneRust (programming language)MicrobiologyGenetics

Abstract

fetched live from OpenAlex

Forty virulence phenotypes of Puccinia triticina were identified from 295 isolates collected across Canada in 2002 on 16 Triticum aestivum ‘Thatcher’ near-isogenic lines. The most frequent virulence phenotypes across Canada were MBDS (30.2%), TGBJ (22.0%), TBBJ (9.5%), and TBDS (7.8%). There were 10 virulence phenotypes identified among 24 isolates from Quebec; MBRK (29.2%), TBRJ (16.7%), MBRJ (12.5%), and TLGJ (12.5%) were the most frequent. Ten virulence phenotypes were identified among 22 isolates from Ontario, with PCLR and PCMR (both 22.7%) being the most frequent. There were 25 virulence phenotypes identified from 234 isolates collected in Manitoba and southeastern Saskatchewan; MBDS (32.9%), TGBJ (27.4%), and TBBJ (11.5%) were the most frequent. The frequency of virulence to Lr16 declined in Manitoba and Saskatchewan from 74.1% in 2001 to 33.3% in 2002 while the frequency of virulence to Lr17 increased from 23.8% in 2001 to 53.4% in 2002. Five virulence phenotypes were identified from 15 isolates collected in Alberta. These were MBDS (11 isolates), TBBJ, TBDS, TCRK, and TGBJ (all one isolate each). A subsample representative of the field isolates collected in 2002 was tested for virulence on adult plants. All 71 isolates tested were avirulent to adult-plant resistance genes Lr22a, Lr34, and Lr3, and to seedling genes Lr21 and Lr32 which are best expressed in adult plants. The isolates varied for virulence to adult-plant resistance genes Lr12 and Lr37, and only one isolate was avirulent to Lr13.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.018
Threshold uncertainty score0.126

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.002
Science and technology studies0.0020.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.181
Teacher spread0.167 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations28
Published2005
Admission routes3
Has abstractyes

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