Bibliographic record
Abstract
In this paper, we investigate how to scale hierarchical clustering methods (such as OPTICS) to extremely large databases by utilizing data compression methods (such as BIRCH or random sampling). We propose a three step procedure: 1) compress the data into suitable representative objects; 2) apply the hierarchical clustering algorithm only to these objects; 3) recover the clustering structure for the whole data set, based on the result for the compressed data. The key issue in this approach is to design compressed data items such that not only a hierarchical clustering algorithm can be applied, but also that they contain enough information to infer the clustering structure of the original data set in the third step. This is crucial because the results of hierarchical clustering algorithms, when applied naively to a random sample or to the clustering features (CFs) generated by BIRCH, deteriorate rapidly for higher compression rates. This is due to three key problems, which we identify. To solve these problems, we propose an efficient post-processing step and the concept of a Data Bubble as a special kind of compressed data item. Applying OPTICS to these Data Bubbles allows us to recover a very accurate approximation of the clustering structure of a large data set even for very high compression rates. A comprehensive performance and quality evaluation shows that we only trade very little quality of the clustering result for a great increase in performance.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.004 | 0.030 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.001 | 0.001 |
| Bibliometrics | 0.002 | 0.003 |
| Science and technology studies | 0.002 | 0.002 |
| Scholarly communication | 0.004 | 0.012 |
| Open science | 0.003 | 0.007 |
| Research integrity | 0.002 | 0.003 |
| Insufficient payload (model declined to judge) | 0.025 | 0.008 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".