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Record W4244727846 · doi:10.1128/9781555819217.ch29

Transposons Tn<i>10</i> and Tn<i>5</i>

2015· book-chapter· he· W4244727846 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueASM Press eBooks · 2015
Typebook-chapter
Languagehe
FieldAgricultural and Biological Sciences
TopicChromosomal and Genetic Variations
Canadian institutionsWestern University
Fundersnot available
KeywordsTn10Transposable elementTransposaseTransposition (logic)Insertion sequenceDNATransposeGeneticsSleeping Beauty transposon systemBiologyGenePhysicsMathematicsGenome

Abstract

fetched live from OpenAlex

Tn 10 and Tn5 are composite bacterial transposons (Fig. 1). Both these transposons, as well as their respective IS elements (IS10 and IS50), transpose by a nonreplicative cut-and-paste mechanism. Tn10/IS10was the first bacterial transposon shown to transpose by the cut-and-paste mechanism and as such provided an early model for this mode of transposition (1,2). In cut-and-paste transposition the transposon is first excised from flanking donor DNA by a pair of transposase-catalyzed double-strand breaks at each transposon end after which the excised transposon is inserted into a target site. Host repair of the transposon-target DNA junction completes the transposition process and leaves a characteristic target-site duplication.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.965
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.080
GPT teacher head0.238
Teacher spread0.158 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it