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Bird species involved in West Nile virus epidemiological cycle in southern Quebec

2020· dataset· en· W4246370098 on OpenAlexaffabout
Ludivine Taieb, Antoinette Ludwig, Nicholas H. Ogden, L. Robbin Lindsay, Mahmood Iranpour, Charles Gagnon, Dominique Bicout

Bibliographic record

VenueAuthorea · 2020
Typedataset
Languageen
FieldMedicine
TopicMosquito-borne diseases and control
Canadian institutionsPublic Health Agency of CanadaUniversité de Montréal
Fundersnot available
KeywordsEnzooticWest Nile virusCulex pipiensBiologyCulexEcologyBlood mealZoologyVirusVirology

Abstract

fetched live from OpenAlex

There have been many studies of the ecology of West Nile Virus (WNV) in the US, including the role of different bird species as reservoirs and mid-late summer shifts of feeding of Culex pipiens-restuans (CPR) mosquitoes from birds to mammals. It is often assumed that these findings are generalizable to neighbouring regions of Canada where WNV is endemic; however there have been little equivalent studies in Canada to confirm that this is reasonable. Here we construct a priority list of bird species likely involved in the transmission of WNV in the greater Montreal area by combining three sources of data i) results of WNV surveillance in wild (dead) birds in the province (2002-2015); ii) evidence from molecular blood meal analysis that bird species are fed upon by CPR, the primary enzootic vectors of WNV in the region, collected in mosquito surveillance in the study area in 2008 and 2014; and iii) a literature review on evidence of sero-prevalence and host competence of resident bird species. Three lists of 18, 23 and 53 bird species, respectively, from the three data sources, and totalizing 67 bird species were identified as potential WNV reservoirs/amplifiers. Of the 23 species identified from CPR blood meals, Common starlings, American robins, Song and House sparrows ranked the highest as possible WNV reservoirs/amplifiers. In addition, we found using logistic regression that the proportion of blood meals taken from birds compared to mammals by CPR declined significantly with surveillance week. These findings indicate broad similarity in the ecology of WNV between the study region and northeastern US although the relative importance of some bird species as hosts of CPR and WNV in this area may be somewhat different, and field studies are needed to confirm this, and explore the consequences for the risk of WNV to the human population.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.214
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.294
Teacher spread0.259 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes2
Has abstractyes

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