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Record W4249422946 · doi:10.1016/j.febslet.2014.05.001

Tumor suppression

2014· editorial· en· W4249422946 on OpenAlexaff
Shairaz Baksh

Bibliographic record

VenueFEBS Letters · 2014
Typeeditorial
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicHistone Deacetylase Inhibitors Research
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsCancerInternational agencyLung cancerBreast cancerMedicineColorectal cancerEpigeneticsDiseaseOncologyGerontologyCancer researchDemographyInternal medicineBiologyGenetics

Abstract

fetched live from OpenAlex

Cancer affects 1 in 3 adults and 1 in 330 children worldwide. According to the latest update by the International WHO Agency for Research on Cancer http://www.iarc.fr/en/media-centre/pr/2013/pdfs/pr223_E.pdf, there were about 14 million new cases of cancer and 8 million deaths owing to this disease in 2012. Projections suggest that there will be approximately 20 million new cases per year in the not-so-distant year 2025. The most commonly diagnosed cancers worldwide are lung (13.0% of the total), breast (11.9% of the total), and colorectal (9.7% of the total) cancers with deaths from lung, liver and stomach cancer being in the top 3. These statistics are alarming but highlight the need for innovative, multi-disciplinary and joint ventures to battle cancer. Our understanding of cancer initiation and progression has increased exponentially since the first proto-oncogene, Ras, was identified in 1993. Genetics and epigenetics play a major role in our molecular understanding of the pathogenesis of cancer, as cancer is predominantly a genetic disease. Numerous research groups all over the world, including those of Bert Vogelstein, Robert Weinberg, Douglas Hannahan, Scott Lowe, Tyler Jacks, Tak Mak, Julian Downward, Michael Karin and the late Stanley Korsmeyer to mention a few, have contributed significantly to the advances made in the field. Numerous publications using animal models, in vitro cell culture, genome wide association studies and samples from cancer patients have demonstrated that cancer-causing signaling pathways are complex and influenced by multiple insults. Distinct genes initiate and maintain the cancer phenotype and are the target of therapeutic intervention. Targeted therapy has worked well for some cancers, such as Her2 inhibitors for breast cancer and c-ABL inhibitors for leukemia. However, there is a great need to rethink drug discovery strategies as we move forward, and we are in dire need for a better understanding of pathways regulating the appearance, growth and propagation of cancer cells and how multiple pathways are connected. This Special Issue attempts to inform and encourage cancer researchers to think about several emerging avenues in cancer signaling involving tumor suppression. The review by Dr. Giancotti on how a cancer cell undergoes dysregulation provides a comprehensive introduction to the topic. Several contributions describe emerging aspects of p53 biology, including novel roles for cytoplasmic p53 (Comel et al.) and p53-mediated regulation of several microRNAs (Li et al.). Tumor-associated microRNAs and their potential in personalized cancer therapy are also discussed in this Special Issue. Updates on numerous tumor suppressor pathways, including PML, RASSF, angiomotins, VHL, ING and NF2/Merlin, are comprehensively described in several reviews. A contribution on pyruvate kinase M2 (PKM2) (Iqbal et al.) emphasizes that cancer can be considered a metabolic disease due to the switch from aerobic metabolism to anaerobic metabolism during growth and metastasis. This review highlights the imperative need to understand the energetic state of tumor cells, so as to design novel therapeutics capable of starving the cell of this energy source and inducing its demise. Lastly, a timely review on autotaxin (Benesch et al.) underscores the importance of the microenvironment of a tumor cell in the complex interplay between stromal and tumor factors. Autotaxin is a secreted enzyme that regulates the production of lysophosphatidate, which is involved in regulating growth and migration of cells, and is a field that warrants attention. As we learn more about the complex molecular circuitries that suppress tumor growth and progression, extensively reviewed in this Special Issue, we might stand a better chance at finding ways to eradicate cancer through rational drug design. Bert Vogelstein estimated several years ago that over 90% of cancer-causing genes are mutated tumor suppressor genes rather than oncogenes. Thus, understanding the molecular mechanisms involved in tumor suppression will greatly aid in the battle against cancer.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Editorial · Consensus signal: Editorial
Teacher disagreement score0.211
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.260
Teacher spread0.255 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreEditorial

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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