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EVOLUTION OF TRIPLOIDY IN APIOS AMERICANA (LEGUMINOSAE) REVEALED BY GENEALOGICAL ANALYSIS OF THE HISTONE H3-D GENE

2004· article· en· W4250832607 on OpenAlexafffund
Simon Joly, Anne Bruneau

Bibliographic record

VenueEvolution · 2004
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicChromosomal and Genetic Variations
Canadian institutionsUniversité de Montréal
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsBiologyPloidyGeneticsEvolutionary biologyGenetic diversityHaplotypeLoss of heterozygosityGeneGenotypeAllelePopulation

Abstract

fetched live from OpenAlex

Autotriploidy is normally considered to be maladaptive in plants because of its association with high levels of sterility. Nonetheless, triploid individuals are found in many plant species and play important roles in plant evolution, in particular as a first step toward tetraploid formation. However, few studies have addressed the evolutionary potential of triploid lineages, which may principally suffer from the impossibility of combining useful mutations in a single genome due to their low fertility. Therefore, triploids acquire genetic diversity only via recurrent evolution and somaclonal mutation. This study evaluates the potential of multiple origins of polyploidy as a source of genetic diversity in Apios americana, a North American legume that possesses both diploid and triploid populations. Ploidy level determination via flow cytometry shows that triploids are mainly restricted to the portion of eastern North America that was covered by ice during the Wisconsinan glaciation 18,000 years ago. This distribution implies that either selection or postglaciation colonization played a role in shaping this cytogeographic pattern. A haplotype network of the single copy nuclear histone H3‐D gene reconstructed using statistical parsimony, together with single‐strand conformational polymorphism analysis, shows that autotriploidy evolved at least three times in this species and that heterozygosity is high in triploids. The genetic diversity found in A americana resulting from recurrent evolution and fixed heterozygosity increases the likelihood of producing successful genotypes and may give the opportunity for triploids to be better fit than diploids in new habitats. This suggests that triploid lineages can exhibit evolutionary potential of their own, and do not serve solely as a first step toward tetraploid formation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.842
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.213
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations29
Published2004
Admission routes2
Has abstractyes

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