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Archaeal Flagella

2008· other· en· W4251320053 on OpenAlexaff
David J. VanDyke, Sandy Y. M. Ng, Bonnie Chaban, John Wu, Ken F. Jarrell

Bibliographic record

VenueEncyclopedia of Life Sciences · 2008
Typeother
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtist diversity and phylogeny
Canadian institutionsQueen's University
Fundersnot available
KeywordsFlagellumArchaeaBiologyOperonCell biologyMotilityProtein filamentBacteriaGeneGeneticsEscherichia coli

Abstract

fetched live from OpenAlex

Abstract The archaeal flagellum is a unique, ‘tail‐like’ structure used for motility by single‐celled organisms belonging to the domain Archaea. These intricate protein assemblies extend from the cell surface, rotating to generate thrust that propels the organism. Although archaeal flagella are functionally similar to the flagella found on bacteria, they differ significantly in structure and presumed mode of assembly. Key concepts The student will learn: Although functionally similar to bacterial flagella, archaeal flagella are unique motility structures in terms of their structure and assembly. The structure of the flagellum can be divided into three distinct components: the filament, hook and anchoring structure. Each of these components is constructed of specific proteins either encoded by genes residing within flagellar operons or of currently unknown genes. Assembly of the archaeal flagellum, which lacks the internal channel found in bacterial flagella, is thus believed to occur via incorporation of protein subunits at the base of the structure after they undergo the necessary posttranslational modifications of signal peptide cleavage and glycan addition. Archaea use this motility apparatus in combination with chemotaxis systems to bias their direction of movement towards environmental conditions more favourable for cell growth.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.050
Threshold uncertainty score0.168

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0500.022

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.239
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

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