MétaCan
Menu
Back to cohort

<i>Eggerthellales</i>

2021· other· en· W4251853755 on OpenAlexaff
Radhey S. Gupta

Bibliographic record

VenueBergey's Manual of Systematics of Archaea and Bacteria · 2021
Typeother
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Phylogenetic Studies
Canadian institutionsMcMaster University
Fundersnot available
KeywordsActinobacteriaPhylogenetic treeCladeType genusBiologyOrder (exchange)Type (biology)GenusGeneticsPhylogeneticsEvolutionary biologyComputational biologyGeneBotanyType speciesPaleontology16S ribosomal RNA

Abstract

fetched live from OpenAlex

Abstract Eg.ger.thel.la'les. N.L. fem. n. Eggerthella , type genus of the order; suff. ‐ ales , ending to denote an order; N.L. fem. pl. n. Eggerthellales , the order of Eggerthella . The order contains the family Eggerthellaceae . The characteristics of this order are the same as that of the family Eggerthellaceae . The species of this order form a distinct clade in phylogenetic trees based on the concatenated sequences of different datasets of proteins. Additionally, the members of this order can be reliably distinguished from those of the order Coriobacteriales and other Actinobacteria , based on multiple molecular markers in the forms of conserved signature inserts/deletions in proteins that are exclusively present in the members of this order. Type genus : Eggerthella Wade et al. 1999 VP . Taxonomic and Nomenclature Notes According to the List of Prokaryotic names with Standing in Nomenclature (LPSN), the taxonomic status of the order Eggerthellales is: correct name (last update, February 2025) * . LPSN classification: Bacteria / Bacillati / Actinomycetota / Coriobacteriia / Eggerthellales The order Eggerthellales can also be recovered in the Genome Taxonomy Database (GTDB) as o__Coriobacteriales (version v220) ** . GTDB classification: d__Bacteria / p__Actinomycetota / c__Coriobacteriia / o__Coriobacteriales * Meier‐Kolthoff et al. ( 2022 ). Nucleic Acids Res , 50 , D801 – D807 ; DOI: 10.1093/nar/gkab902 ** Parks et al. ( 2022 ). Nucleic Acids Res , 50 , D785 – D794 ; DOI: 10.1093/nar/gkab776

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.758
Threshold uncertainty score0.913

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.236
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

Explore more

Same venueBergey's Manual of Systematics of Archaea and BacteriaSame topicGenomics and Phylogenetic StudiesFrench-language works237,207