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Record W4254336160 · doi:10.1099/ijs.0.052209-0

The yeast genus Tortispora gen. nov., description of Tortispora ganteri sp. nov., Tortispora mauiana f.a., sp. nov., Tortispora agaves f.a., sp. nov., Tortispora sangerardonensis f.a., sp. nov., Tortispora cuajiniquilana f.a., sp. nov., Tortispora starmeri f.a., sp. nov. and Tortispora phaffii f.a., sp. nov., reassignment of Candida caseinolytica to Tortispora caseinolytica f.a., comb. nov., emendation of Botryozyma, and assignment of Botryozyma, Tortispora gen. nov. and Trigonopsis to the family Trigonopsidaceae fam. nov.

2013· article· en· W4254336160 on OpenAlexaff
Marc‐André Lachance, Cletus P. Kurtzman

Bibliographic record

VenueINTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicYeasts and Rust Fungi Studies
Canadian institutionsWestern University
FundersUniversidade Federal de Minas GeraisU.S. Department of Agriculture
KeywordsBiologyCladeBotanyGenusAscosporeType speciesZoologyTaxonomy (biology)Ascus (bryozoa)Phylogenetic treeGeneGeneticsSpore

Abstract

fetched live from OpenAlex

We describe the yeast genus Tortispora gen. nov., an early-diverging lineage in the Saccharomycetales that displays the formation of helical ascospores. The genus is based on 16 strains resembling Candida caseinolytica that were isolated from necrotic plant tissue in warm regions of the New World. Based on sequences of the D1/D2 domains of the nuclear large subunit rRNA gene, as well as other data, the strains are assigned to eight distinct species. The species are nutritionally specialized and share the unusual ability to hydrolyse casein and to grow on 1-butanol as sole carbon source. One species of the proposed new genus produces a simple ascus with a helical ascospore, whereas other species of the clade have failed to form ascospores. All species in the clade, including C. caseinolytica, are assigned to Tortispora gen. nov. The new binomials are Tortispora ganteri sp. nov., type species of the genus (SUB 86-469.5(T) = CBS 12581(T) = NRRL Y-17035(T)), Tortispora caseinolytica f.a., comb. nov. (UCD-FST 83-438.3(T) = CBS 7781(T) = NRRL Y-17796(T)), Tortispora mauiana f.a., sp. nov. (UWOPS 87-2430.3(T) = CBS 12803(T) = NRRL Y-48832(T)), Tortispora agaves f.a., sp. nov. (UWOPS 94-257.6(T) = CBS 12794(T) = NRRL Y-63662(T)), Tortispora sangerardonensis f.a., sp. nov. (UWOPS 00-157.1(T) = CBS 12795(T) = NRRL Y-63663(T)), Tortispora cuajiniquilana f.a., sp. nov. (UWOPS 99-344.4(T) = CBS 12796(T) = NRRL Y-63664(T)), Tortispora starmeri f.a., sp. nov. (G 91-702.5(T) = CBS 12793(T) = NRRL Y-63665(T)) and Tortispora phaffii f.a., sp. nov. (UWOPS 91-445.1(T) = CBS 12804(T) = NRRL Y-48833(T)). In addition, species formerly assigned to the genus Ascobotryozyma are reassigned to the genus Botryozyma. The genera Trigonopsis, Botryozyma and Tortispora are assigned to the family Trigonopsidaceae fam. nov.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Science and technology studies, Research integrity
Consensus categoriesMeta-epidemiology (narrow)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.668
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0040.001
Meta-epidemiology (narrow)0.0030.003
Meta-epidemiology (broad)0.0060.002
Bibliometrics0.0020.002
Science and technology studies0.0010.003
Scholarly communication0.0010.001
Open science0.0030.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.237
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations27
Published2013
Admission routes1
Has abstractyes

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