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Record W4254426880 · doi:10.1002/cjp2.2018.4.issue-4

Association of p16 expression with prognosis varies across ovarian carcinoma histotypes:an Ovarian Tumor Tissue Analysis consortium study

2018· paratext· en· W4254426880 on OpenAlexfundno aff

Bibliographic record

VenueThe Journal of Pathology Clinical Research · 2018
Typeparatext
Languageen
FieldMedicine
TopicOvarian cancer diagnosis and treatment
Canadian institutionsnot available
FundersMedical Research and Materiel CommandInstituto de Salud Carlos IIICancer Council TasmaniaCancer Council VictoriaNational Health and Medical Research CouncilNational Center for Advancing Translational SciencesMedical Research CouncilNational Institutes of HealthPeter MacCallum FoundationMinisterio de Economía y CompetitividadCanadian Institutes of Health ResearchCancer Institute NSWBundesministerium für Bildung und ForschungNational Institute for Health and Care ResearchFred C. and Katherine B. Andersen FoundationCalgary Laboratory ServicesUniversity of CambridgeUniversity College LondonCancer Research UKMinnesota Ovarian Cancer AllianceHuntsman Cancer FoundationCancer Council NSWOvarian Cancer AustraliaNational Cancer InstituteUniversität HeidelbergCancer Research SocietyCancer Council South AustraliaPomorski Uniwersytet Medyczny W SzczecinieDeutsches KrebsforschungszentrumCancer AustraliaOvarian Cancer ActionVGH and UBC Hospital FoundationBC Cancer FoundationOak FoundationKræftens BekæmpelseMayo Foundation for Medical Education and ResearchU.S. Department of Defense
KeywordsTissue microarrayOvarian carcinomaHazard ratioCDKN2AImmunohistochemistryOvarian cancerSerous carcinomaSerous fluidCancer researchOncologyMedicinePathologyBiologyInternal medicineCancerConfidence interval

Abstract

fetched live from OpenAlex

We aimed to validate the prognostic association of p16 expression in ovarian high-grade serous carcinomas (HGSC) and to explore it in other ovarian carcinoma histotypes.p16 protein expression was assessed by clinicalgrade immunohistochemistry in 6525 ovarian carcinomas including 4334 HGSC using tissue microarrays from 24 studies participating in the Ovarian Tumor Tissue Analysis consortium.p16 expression patterns were interpreted as abnormal (either overexpression referred to as block expression or absence) or normal (heterogeneous).CDKN2A (which encodes p16) mRNA expression was also analyzed in a subset (n = 2280) mostly representing HGSC (n = 2010).Association of p16 expression with overall survival (OS) was determined within histotypes as was CDKN2A expression for HGSC only.p16 block expression was most frequent in HGSC (56%) but neither protein nor mRNA expression was associated with OS.However, relative to heterogeneous expression, block expression was associated with shorter OS in endometriosis-associated carcinomas, clear cell [hazard ratio (HR): 2.02, 95% confidence (CI) 1.47-2.77,p < 0.001] and endometrioid (HR: 1.88, 95% CI 1.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.022
metaresearch head score (Gemma)0.003
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesResearch integrity, Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.052
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0220.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0030.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.003
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.128
GPT teacher head0.495
Teacher spread0.367 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2018
Admission routes1
Has abstractyes

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