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Record W4255849721 · doi:10.32920/ryerson.14656425

Bacterial survival at solid-air interfaces: from individual response to population ecology

2021· preprint· en· W4255849721 on OpenAlexaff
Roshanak Pashang

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsToronto Metropolitan University
Fundersnot available
KeywordsDesiccationPseudomonas stutzeriPopulationBiologyAcclimatizationEcologyBacteriaPseudomonas putidaArthrobacterHabitatGeneticsMedicine

Abstract

fetched live from OpenAlex

Acclimation and flexible response mechanisms are ancient survival modes allowing prokaryotic cells to conquer diverse habitats and maintain viability in nature. Evidently, lack of water significantly impacts cellular response making it vital for individual cells to benefit from population support and access survival means available beyond the cell boundaries. Microscopy of dried bacterial cells at solid-air interfaces suggested that cell membrane breakdown didn’t occur for months. Viable counts for Gram-positive Arthrobacter spp. and Gram-negative Pseudomonas stutzeri were significantly higher for larger population density during prolonged periods of desiccation and nutrient starvation. Presence of homogenized cells extended short-term survival of Arthrobacter spp. cells, while heat-killed cells significantly extended viability of all populations. It appeared that huddled zombielike cells allow preservation and recycling of essential survival components within a population. Understanding population-mediated survival at solid-air interfaces is key for monitoring and controlling bacteria including in deep geological repositories for nuclear waste management.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.277
Teacher spread0.251 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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