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Record W4280500891 · doi:10.3389/fevo.2022.898805

Functional Responses Shape Node and Network Level Properties of a Simplified Boreal Food Web

2022· article· en· W4280500891 on OpenAlexafffundabout
Jenilee Gobin, Thomas J. Hossie, Rachael Derbyshire, Samuel Sonnega, Tucker W. Cambridge, Lee E. Scholl, Nicolas Diaz Kloch, Arthur Scully, Kiefer Thalen, Graeme Smith, Carly B. Scott, Francis Quinby, Jordan N. H. Reynolds, Hannah A. Miller, Holly Faithfull, O. Lucas, Christopher Dennison, Jordan McDonald, Stan Boutin, Mark O’Donoghue, Charles J. Krebs, Rudy Boonstra, Dennis L. Murray

Bibliographic record

VenueFrontiers in Ecology and Evolution · 2022
Typearticle
Languageen
FieldMedicine
TopicMathematical and Theoretical Epidemiology and Ecology Models
Canadian institutionsThe Scarborough HospitalUniversity of TorontoUniversity of British ColumbiaUniversity of AlbertaTrent University
FundersNatural Sciences and Engineering Research Council of CanadaCanada Research Chairs
KeywordsPredationFunctional responseFood webTrophic levelEcologyGeneralityPredatorNode (physics)BorealBiologyPsychologyPhysics

Abstract

fetched live from OpenAlex

Ecological communities are fundamentally connected through a network of trophic interactions that are often complex and difficult to model. Substantial variation exists in the nature and magnitude of these interactions across various predators and prey and through time. However, the empirical data needed to characterize these relationships are difficult to obtain in natural systems, even for relatively simple food webs. Consequently, prey-dependent relationships and specifically the hyperbolic form (Holling’s Type II), in which prey consumption increases with prey density but ultimately becomes saturated or limited by the time spent handling prey, are most widely used albeit often without knowledge of their appropriateness. Here, we investigate the sensitivity of a simplified food web model for a natural, boreal system in the Kluane region of the Yukon, Canada to the type of functional response used. Intensive study of this community has permitted best-fit functional response relationships to be determined, which comprise linear (type I), hyperbolic (type II), sigmoidal (type III), prey- and ratio-dependent relationships, and inverse relationships where kill rates of alternate prey are driven by densities of the focal prey. We compare node- and network-level properties for a food web where interaction strengths are estimated using best-fit functional responses to one where interaction strengths are estimated exclusively using prey-dependent hyperbolic functional responses. We show that hyperbolic functional responses alone fail to capture important ecological interactions such as prey switching, surplus killing and caching, and predator interference, that in turn affect estimates of cumulative kill rates, vulnerability of prey, generality of predators, and connectance. Exclusive use of hyperbolic functional responses also affected trends observed in these metrics over time and underestimated annual variation in several metrics, which is important given that interaction strengths are typically estimated over relatively short time periods. Our findings highlight the need for more comprehensive research aimed at characterizing functional response relationships when modeling predator-prey interactions and food web structure and function, as we work toward a mechanistic understanding linking food web structure and community dynamics in natural systems.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.061
Threshold uncertainty score0.287

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.242
Teacher spread0.201 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2022
Admission routes3
Has abstractyes

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