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Record W4282843168 · doi:10.1093/cdn/nzac072.002

Prebiotic Mannan-Oligosaccharides and Their Role in the Gut Microbiota

2022· article· en· W4282843168 on OpenAlex
Rachel Asbury, Erica Dipede, Bradley A. Saville

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueCurrent Developments in Nutrition · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsPathogenic bacteriaMicrobiologyBacteriaPrebioticMannanBacterial adhesinBiologyMicrobiomePathogenAgglutination (biology)Escherichia coliBiochemistryPolysaccharideAntibodyImmunology

Abstract

fetched live from OpenAlex

Pathogenic bacterial infections in the gastrointestinal tract compromise the health and function of the gut microbiome, and the rising incidence of antibiotic-resistant bacterial strains has resulted in initiatives seeking alternative treatments. Some prebiotic fibers, such as mannan-oligosaccharides (MOS), may be a promising alternative. In addition to selectively growing commensal bacteria and creating a diverse gut microbiota, MOS have a high affinity for specific binding arms on the structure of some pathogenic bacteria and can prevent bacterial adhesion to intestinal epithelial cells. The ability of MOS to bind pathogenic bacteria and selectively grow commensal bacteria is influenced by its carbohydrate structure. However, there are no published studies to our knowledge on the optimization of MOS structure for both pathogen binding and commensal bacterial growth. Therefore, the focus of this work is to (1) assess the effectiveness of MOS on in vitro agglutination of various pathogenic bacterial species and, (2) explore the impact of MOS carbohydrate structure on pathogen binding. Characterization of MOS will be performed using high performance liquid chromatography (HPLC) and liquid chromatography mass spectrometry (LCMS). To assess the ability of MOS to bind pathogenic bacteria, in vitro agglutination and growth inhibition assays will be performed. Prebiotic performance of MOS on commensal bacterial growth will be assessed using in vitro mixed culture analyses of both commensal and pathogenic bacterial species. Protocol Abstract This research will inform further investigations of the ability of prebiotics such as MOS to support intestinal health through the selective growth of commensal bacteria and binding of pathogenic bacteria, as a nutritional supplement and as an alternative to antibiotics. Natural Sciences and Engineering Research Council of Canada.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.900
Threshold uncertainty score0.406

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.256
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it