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Record W4282913600 · doi:10.1136/gutjnl-2022-327661

Correspondence on “PICaSSO Histologic Remission Index (PHRI) in ulcerative colitis: development of a novel simplified histological score for monitoring mucosal healing and predicting clinical outcomes and its applicability in an artificial intelligence system” by Gui <i>et al</i>

2022· letter· en· W4282913600 on OpenAlexaff
Emily C L Wong, Parambir S. Dulai, Neeraj Narula

Bibliographic record

VenueGut · 2022
Typeletter
Languageen
FieldImmunology and Microbiology
TopicBiomarkers in Disease Mechanisms
Canadian institutionsMcMaster University
Fundersnot available
KeywordsVertebrateBiologyCancerColorectal cancerZoologyGenetics

Abstract

fetched live from OpenAlex

<h3>ABSTRACT</h3> Cancer rates vary widely across vertebrate groups. Identifying species with lower-than-expected cancer prevalence can help establish new models for unraveling the biological mechanisms underlying cancer resistance. Theoretical predictions suggest that cancer prevalence should be positively associated with body mass and longevity in animals. Yet, in mammals, the best studied vertebrates in terms of cancer, this prediction does not hold true: a phenomenon known as Peto’s paradox. Despite mounting work disentangling the biological basis of Peto’s paradox, it is still relatively unknown whether other major vertebrate groups behave similarly to mammals or might hold new keys to understanding cancer biology. Here, we present the largest dataset available so far on cancer prevalence across all major groups of tetrapod vertebrates: amphibians, birds, crocodilians, mammals, squamates (lizards and snakes), and turtles. We investigated cancer prevalence within and among these groups and its relationship with body mass and lifespan. This is the first study to analyze non-avian reptile groups separately. We found remarkably low cancer prevalence in birds, crocodilians, and turtles. Counter to previous studies, we found that body mass and lifespan are inversely related to cancer prevalence in mammals, although Peto’s paradox still holds true in this group. Conversely, we rejected Peto’s paradox in birds and squamates, as neoplasia prevalence was positively associated with body mass in these groups. The exceptionally low cancer prevalence in turtles and extensive variation in cancer prevalence amongst vertebrate families hold particular promise for identifying species with novel mechanisms of cancer resistance.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.106
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.109
GPT teacher head0.364
Teacher spread0.255 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2022
Admission routes1
Has abstractyes

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