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Record W4284883603 · doi:10.1113/jp282798

Genetic variation in HIF‐2α attenuates ventilatory sensitivity and carotid body growth in chronic hypoxia in high‐altitude deer mice

2022· article· en· W4284883603 on OpenAlexaff
Catherine M. Ivy, Jonathan P. Velotta, Zachary A. Cheviron, Graham R. Scott

Bibliographic record

VenueThe Journal of Physiology · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicHigh Altitude and Hypoxia
Canadian institutionsMcMaster University
Fundersnot available
KeywordsCarotid bodyBiologyHypoxia (environmental)Hypoxic ventilatory responseInternal medicineEffects of high altitude on humansEndocrinologyRespiratory systemAnatomyMedicineOxygen

Abstract

fetched live from OpenAlex

Abstract The gene encoding HIF‐2α, Epas1 , has experienced a history of natural selection in many high‐altitude taxa, but the functional role of mutations in this gene is still poorly understood. We investigated the influence of the high‐altitude variant of Epas1 in North American deer mice ( Peromyscus maniculatus ) on the control of breathing and carotid body growth during chronic hypoxia. We created hybrids between high‐ and low‐altitude populations of deer mice to disrupt linkages between genetic loci so that the physiological effects of Epas1 alleles ( Epas1 H and Epas1 L , respectively) could be examined on an admixed genomic background. In general, chronic hypoxia (4 weeks at 12 kPa O 2 ) enhanced ventilatory chemosensitivity (assessed as the acute ventilatory response to hypoxia), increased total ventilation and arterial O 2 saturation during progressive poikilocapnic hypoxia, and increased haematocrit and blood haemoglobin content across genotypes. However, the effects of chronic hypoxia on ventilatory chemosensitivity were attenuated in mice that were homozygous for the high‐altitude Epas1 allele ( Epas1 H/H ). Carotid body growth and glomus cell hyperplasia, which was strongly induced in Epas1 L/L mice in chronic hypoxia, was not observed in Epas1 H/H mice. Epas1 genotype also modulated the effects of chronic hypoxia on metabolism and body temperature depression in hypoxia, but had no effects on haematological traits. These findings confirm the important role of HIF‐2α in modulating ventilatory sensitivity and carotid body growth in chronic hypoxia, and show that genetic variation in Epas1 is responsible for evolved changes in the control of breathing and metabolism in high‐altitude deer mice. image Key points High‐altitude natives of many species have experienced natural selection on the gene encoding HIF‐2α, Epas1 , including high‐altitude populations of deer mice. HIF‐2α regulates ventilation and carotid body growth in hypoxia, and so the genetic variants in Epas1 in high‐altitude natives may underlie evolved changes in control of breathing. Deer mice from controlled crosses between high‐ and low‐altitude populations were used to examine the effects of Epas1 genotype on an admixed genomic background. The high‐altitude variant was associated with reduced ventilatory chemosensitivity and carotid body growth in chronic hypoxia, but had no effects on haematology. The results help us better understand the genetic basis for the unique physiological phenotype of high‐altitude natives.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.937
Threshold uncertainty score0.365

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.218
Teacher spread0.212 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations17
Published2022
Admission routes1
Has abstractyes

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