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Record W4285297392 · doi:10.3114/sim.2022.101.06

Genera of phytopathogenic fungi: GOPHY 4

2022· article· en· W4285297392 on OpenAlex
Qian Chen, Mounes Bakhshi, Y. Balcì, Kirk Broders, R. Cheewangkoon, S F Chen, Xinlei Fan, David Gramaje, F. Halleen, Marília Horta Jung, Ning Jiang, Thomas Jung, Tomáš Májek, Seonju Marincowitz, Ivan Milenković, L. Mostert, Chiharu Nakashima, I Nurul Faziha, Meng Pan, Mubashar Raza, Bruno Scanu, Christoffel F. J. Spies, L Suhaizan, Hiroyuki Suzuki, Cheng Tian, Michal Tomšovský, J. R. Úrbez‐Torres, W Wang, Brenda D. Wingfield, Michael J. Wingfield, Qingyong Yang, XIANG-LI YANG, Rasoul Zare, Pengbo Zhao, J.Z. Groenewald, P.W. Crous

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueStudies in Mycology · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsBiologyCercosporaBotanyGenusTaxonMycobiotaAscochytaLeaf spotBlight

Abstract

fetched live from OpenAlex

This paper is the fourth contribution in the Genera of Phytopathogenic Fungi (GOPHY) series. The series provides morphological descriptions and information about the pathology, distribution, hosts and disease symptoms, as well as DNA barcodes for the taxa covered. Moreover, 12 whole-genome sequences for the type or new species in the treated genera are provided. The fourth paper in the GOPHY series covers 19 genera of phytopathogenic fungi and their relatives, including Ascochyta, Cadophora, Celoporthe, Cercospora, Coleophoma, Cytospora, Dendrostoma, Didymella, Endothia, Heterophaeomoniella, Leptosphaerulina, Melampsora, Nigrospora, Pezicula, Phaeomoniella, Pseudocercospora, Pteridopassalora, Zymoseptoria , and one genus of oomycetes, Phytophthora . This study includes two new genera, 30 new species, five new combinations, and 43 typifications of older names.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.857
Threshold uncertainty score0.393

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.290
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it