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Adaptive Cycle-consistent Adversarial Network for Malaria Blood Cell Image Synthetization

2021· article· en· W4285347669 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldEngineering
TopicImage Processing Techniques and Applications
Canadian institutionsYork University
Fundersnot available
KeywordsDiscriminatorComputer scienceArtificial intelligencePattern recognition (psychology)Convolutional neural networkGenerator (circuit theory)MalariaFeature (linguistics)AlgorithmBiology

Abstract

fetched live from OpenAlex

Malaria is a tropical infectious disease that causes massive global deaths. The convolution neural network (CNN) models can theoretically classify the malaria infected blood cells from normal cells, but they are vulnerable to network attacks even with simple uniform noise. A typical drawback of CNN is that the algorithm cannot properly capture the meaningful patterns with clinical significance. We propose a novel adaptive cycle-consistent adversarial network (Ad Cycle GAN) to synthesize malaria significant patterns based on a homogeneous image template with randomness. The Ad Cycle GAN model consists of a pretrained convolutional variational autoencoder (CVAE) and conventional cycle-consistent adversarial network (Cycle GAN). The CVAE model is trained by a large, segmented blood cell dataset with 27,578 images. The model is optimized for 120 epochs. The CVAE is pipelined to a conventional Cycle GAN model with two generator-discriminator combinations. The real malaria positive images are at first sent to the pretrained CVAE to generate template images for the adversarial optimization with the real images. Therefore, the optimization process is to use generator G to convert the CVAE generated images from the synthetic domain (X) to the real malaria positive image domain (Y), then use generator F to convert the real malaria positive images from the real positive image domain (Y) to the CVAE synthetic image domain (X). The total generator loss is composed of adversarial loss, cycle loss, and identity loss, all loss terms are computed by least squared loss. The Ad Cycle GAN architecture is optimized by 150 epochs. When using a pretrained classifier to differentiate the real and synthetic malaria positive image, 99.61% of the real images from the real image set are accurately recognized, compared to 86.6% of the synthetic images are accurately classified. The average score of Frechet Inception Distance (FID) of the generated images by the Ad Cycle GAN is 0.0053 (Std=0.0004). By human eye observation, the Ad Cycle GAN generated images have reasonable fidelity as real blood cells with meaningful pathological patterns that properly mimics real malaria infected blood cells. The proposed Ad Cycle model can generate synthetic malaria infected blood cell images to successfully optimize the deep neural network model for high classification accuracy. We conclude that the new Ad Cycle GAN model can generate high quality malaria infected blood cell images with good diversity.

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Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.418
Threshold uncertainty score0.428

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.209
Teacher spread0.201 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it