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Record W4286669170 · doi:10.1101/2022.07.21.501057

Hybrid Rank Aggregation (HRA): A novel rank aggregation method for ensemble-based feature selection

2022· preprint· en· W4286669170 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2022
Typepreprint
Languageen
FieldMathematics
TopicAdvanced Statistical Methods and Models
Canadian institutionsPublic Health OntarioUniversity of TorontoPrincess Margaret Cancer Centre
FundersNatural Sciences and Engineering Research Council of CanadaProstate Cancer Canada
KeywordsFeature selectionCategorical variableComputer scienceFeature (linguistics)Selection (genetic algorithm)Rank (graph theory)Artificial intelligenceData miningMachine learningPattern recognition (psychology)Mathematics

Abstract

fetched live from OpenAlex

Abstract Background Feature selection (FS) reduces the dimensions of high dimensional data. Among many FS approaches, ensemble-based feature selection (EFS) is one of the commonly used approaches. The rank aggregation (RA) step influences the feature selection of EFS. Currently, the EFS approach relies on using a single RA algorithm to pool feature performance and select features. However, a single RA algorithm may not always give optimal performance across all datasets. Method and Results This study proposes a novel hybrid rank aggregation (HRA) method to perform the RA step in EFS which allows the selection of features based on their importance across different RA techniques. The approach allows creation of a RA matrix which contains feature performance or importance in each RA technique followed by an unsupervised learning-based selection of features based on their performance/importance in RA matrix. The algorithm is tested under different simulation scenarios for continuous outcomes and several real data studies for continuous, binary and time to event outcomes and compared with existing RA methods. The study found that HRA provided a better or at par robust performance as compared to existing RA methods in terms of feature selection and predictive performance of the model. Conclusion HRA is an improvement to current single RA based EFS approaches with better and robust performance. The consistent performance in continuous, categorical and time to event outcomes suggest the wide applicability of this method. While the current study limits the testing of HRA on cross-sectional data with input features of a continuous distribution, it could be applied to longitudinal and categorical data.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.004
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.343
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.004
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.050
GPT teacher head0.338
Teacher spread0.288 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it