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Record W4288297849

Homodimer Interface Mutations of Human Galectin-7 alter Its Biological Activity

2019· preprint· en· W4288297849 on OpenAlexaff
Ngoc Thu Hang Pham, Myriam Létourneau, Marlène Fortier, Carolina Perusquía Hernández, Marie-Aude Pinoteau, Jacinthe Gagnon, Philippe Egesborg, David Chatenet, Yves St‐Pierre, Charles Calmettes, Nicolas Doucet

Bibliographic record

VenueHAL (Le Centre pour la Communication Scientifique Directe) · 2019
Typepreprint
Languageen
FieldImmunology and Microbiology
TopicGalectins and Cancer Biology
Canadian institutionsArmand Frappier Museum
Fundersnot available
KeywordsInterface (matter)Galectin-3Cell biologyComputer scienceChemistryBiologyBiochemistryImmunology
DOInot available

Abstract

fetched live from OpenAlex

<p>Human galectins are beta-galactoside binding proteins subdivided into three groups in accordance
\nwith their structural organization: tandem repeat, chimera, and prototype. Among these galectins,
\nprototype galectin-7 (GAL-7), characterized by a homodimeric molecular organization of its carbohydrate recognition domain (CRD), is involved in different types of cancer, including carcinomas, lymphomas and melanomas. Its overexpression in tumor cells not only confers resistance to cell death
\nstimuli, but extracellular GAL-7 also induces apoptosis of lymphocytes, abrogating immune system
\nresponse against tumor antigens. Consequently, GAL-7 is a promising target for cancer therapy. To this
\nday, the development of GAL-7 modulators has almost exclusively focused on small-molecule Glycan Binding Site (GBS) inhibitors aimed at perturbation of glycoreceptor interactions. However, due to high GBS
\nsimilarity among different galectin homologs, this remains a high risk strategy because of unwanted offtarget effects on other beneficial anti-tumor galectins. Furthermore, GBS inhibitors are ineffective at targeting glycan-independent function of GAL-7. New approaches are thus required to develop effective and
\nhighly specific GAL-7 inhibitors. Prior structural investigations of ancestral galectins have suggested that
\nstabilization of their oligomeric state through evolutionary pressure improves ligand affinity and biological
\nfunction. Since destabilization of GAL-7 architecture could potentially alter its affinity towards glycoproteins
\nand biological function, our main research objective is to dissect the molecular importance of GAL-7 homodimer formation in celullar function. In this study, we will present the impact of homodimer interface mutations on protein stability and induction of Jurkat T-cell apoptosis.</p>

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.027
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.275
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

Explore more

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