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Record W4288425100 · doi:10.1038/s41531-022-00360-5

Evaluation of the PREDIGT score’s performance in identifying newly diagnosed Parkinson’s patients without motor examination

2022· article· en· W4288425100 on OpenAlexafffund
Juan Li, Tiago Mestre, Brit Mollenhauer, Mark Frasier, Julianna J. Tomlinson, Claudia Trenkwalder, Tim Ramsay, Douglas G. Manuel, Michael G. Schlossmacher

Bibliographic record

Venuenpj Parkinson s Disease · 2022
Typearticle
Languageen
FieldMedicine
TopicParkinson's Disease Mechanisms and Treatments
Canadian institutionsOttawa Public HealthOttawa HospitalUniversity of Ottawa
FundersParkinson CanadaOttawa HospitalDepartment of Medicine, Ottawa HospitalMichael J. Fox Foundation for Parkinson's Research
KeywordsMedicineParkinson's diseaseInternal medicineHyposmiaCohortIncidence (geometry)Area under the curveGastroenterologyDisease

Abstract

fetched live from OpenAlex

Several recent publications described algorithms to identify subjects with Parkinson's disease (PD). In creating the "PREDIGT Score", we previously developed a hypothesis-driven, simple-to-use formula to potentially calculate the incidence of PD. Here, we tested its performance in the 'De Novo Parkinson Study' (DeNoPa) and 'Parkinson's Progression Marker Initiative' (PPMI); the latter included participants from the 'FOllow Up persons with Neurologic Disease' (FOUND) cohort. Baseline data from 563 newly diagnosed PD patients and 306 healthy control subjects were evaluated. Based on 13 variables, the original PREDIGT Score identified recently diagnosed PD patients in the DeNoPa, PPMI + FOUND and the pooled cohorts with area-under-the-curve (AUC) values of 0.88 (95% CI 0.83-0.92), 0.79 (95% CI 0.72-0.85), and 0.84 (95% CI 0.8-0.88), respectively. A simplified version (8 variables) generated AUC values of 0.92 (95% CI 0.89-0.95), 0.84 (95% CI 0.81-0.87), and 0.87 (0.84-0.89) in the DeNoPa, PPMI, and the pooled cohorts, respectively. In a two-step, screening-type approach, self-reported answers to a questionnaire (step 1) distinguished PD patients from controls with an AUC of 0.81 (95% CI 0.75-0.86). Adding a single, objective test (Step 2) further improved classification. Among seven biological markers explored, hyposmia was the most informative. The composite AUC value measured 0.9 (95% CI 0.88-0.91) in DeNoPa and 0.89 (95% CI 0.84-0.94) in PPMI. These results reveal a robust performance of the original PREDIGT Score to distinguish newly diagnosed PD patients from controls in two established cohorts. We also demonstrate the formula's potential applicability to enriching for PD subjects in a population screening-type approach.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.012
metaresearch head score (Gemma)0.019
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.063

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0120.019
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0030.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.285
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2022
Admission routes2
Has abstractyes

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