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Record W4289782436 · doi:10.1101/2022.08.03.22278384

A cross-sectional audit and survey of Open Science and Data Sharing practices at The Montreal Neurological Institute-Hospital

2022· preprint· en· W4289782436 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenuemedRxiv · 2022
Typepreprint
Languageen
FieldMedicine
TopicEthics in Clinical Research
Canadian institutionsUniversity of OttawaOttawa Hospital
FundersMontreal Neurological Institute and Hospital
KeywordsAuditOpen scienceData sharingPsychologyMedicineMedical educationFamily medicineAlternative medicineAccountingBusiness

Abstract

fetched live from OpenAlex

Abstract Objectives To audit all publications produced by Montreal Neurological Institute-Hospital researchers regarding open science practices and to survey Neuro-based researchers about barriers and facilitators to data sharing. Setting, design and participants In the first study, we retrieved 313 unique publications and collated all Neuro publications from 2019 and extracted information from each article pertaining to data sharing and other open science practices. We included all empirical papers and pre-prints that were reported in English. In the second study, one hundred twenty-four participants (out of 553) completed the survey, a response rate of 22.42%. We surveyed all Neuro researchers. Primary and secondary outcomes for the audit we examined data sharing and open science practices. For the survey, we asked participants about their data sharing practices. Results We found that 66.5% of these publications (n=208) included a data sharing statement. Overall, 74.5% (n=155) of articles had data that was publicly available. When examining broader open science practices, rates of compliance tended to be lower. For example, 94.9% (n=297) of publications failed to register a protocol. Among participants who had published a first or last authored paper in the past year, most participants, 53 of 74 (71.62%), reported that they had openly shared their research data. Less than half of the participants 37.50% (n=45) reported having engaged in training related to data sharing within the last 12 months. Conclusion We found that half of all publications included in the audit shared data. Participants indicated an appetite for resources for learning about data sharing signaling a willingness to perform better. Strengths and limitations of this study To serve as a baseline to benchmark for improvements in data sharing and other open science practices To measure progress over time. The results of the study cannot be generalized. It is hard to measure changes in the community.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Direct model labels (unvalidated)

Per-model category and study-design labels from the labeling rounds. They are machine output, unvalidated, and the disagreement between models ships as data. No study design here is MEDLINE-validated yet.

Model armCategoriesStudy designConfidence
gemmaMetaresearchOpen science
Domain: Reproducibility · Genre: Empirical
About the Canadian research system: no · About a Canadian topic: no
Observationallow
gptMetaresearchOpen science
Domain: Reproducibility · Genre: Empirical
About the Canadian research system: no · About a Canadian topic: no
Observationalmedium
models agreeAgreement compares identical category sets and study designs across arms.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.051
metaresearch head score (Gemma)0.237
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Science and technology studies, Open science, Research integrity
Consensus categoriesMetaresearch, Open science
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.186
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0510.237
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.005
Scholarly communication0.0010.000
Open science0.0060.104
Research integrity0.0000.004
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.695
GPT teacher head0.616
Teacher spread0.079 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it