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Record W4290635226 · doi:10.1017/s0021859622000442

On solving an isotope dilution model for the partition of phenylalanine and tyrosine uptake by the liver of lactating dairy cows

2022· article· en· W4290635226 on OpenAlexafffund
L.A. Crompton, Leslie L. McKnight, C.K. Reynolds, J.L. Ellis, J. Dijkstra, J. France

Bibliographic record

VenueThe Journal of Agricultural Science · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMuscle metabolism and nutrition
Canadian institutionsUniversity of GuelphResearch Canada
FundersBiotechnology and Biological Sciences Research CouncilNatural Sciences and Engineering Research Council of CanadaCanada Research ChairsDepartment for Environment, Food and Rural Affairs, UK GovernmentMilk Development Council
KeywordsPhenylalanineTyrosineIsotope dilutionAmino acidChemistryMetabolismIntracellularBiochemistryHydroxylationInternal medicineChromatographyMedicineEnzymeMass spectrometry

Abstract

fetched live from OpenAlex

Abstract An isotope dilution model for partitioning phenylalanine and tyrosine uptake by the liver of the lactating dairy cow is constructed and solved in the steady state. An original ten-pool model is adopted and solved by cleaving it into two five-pool sub-models, one representing phenylalanine and the other tyrosine. If assumptions are made, model solution permits calculation of the rate of phenylalanine and tyrosine uptake from portal vein and hepatic arterial blood supply, hydroxylation, and synthesis and degradation of constitutive protein. The model requires the measurement of plasma flow rate through the liver in combination with amino acid concentrations and plateau isotopic enrichments in arterial and portal and hepatic vein plasma during a constant infusion of [1-13C]phenylalanine and [2,3,5,6-2H]tyrosine tracers. It also requires estimates of the rate of oxidation and protein export secretion. Analysis of measurement errors in experimental enrichments and infusion rates on model solutions indicated that accurate values of the intracellular and extracellular enrichments are central to minimising errors in the calculated flows. Solving the model by cleaving into two five-pool schemes rather than solving the ten-pool scheme directly is preferred as there appears to be less compounding of errors and the results consistently appear to be more biologically feasible. The model provides a means for assessing the impact of hepatic metabolism on amino acid availability to peripheral tissues such as the mammary gland.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.028
Threshold uncertainty score0.056

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.241
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes2
Has abstractyes

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