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Record W4292379765 · doi:10.1111/gcb.16398

Global patterns in endemicity and vulnerability of soil fungi

2022· article· en· W4292379765 on OpenAlexaff
Leho Tedersoo, Vladimir Mikryukov, Alexander Zizka, Mohammad Bahram, Niloufar Hagh‐Doust, Sten Anslan, Oleh Prylutskyi, Manuel Delgado‐Baquerizo, Fernando T. Maestre, Jaan Pärn, Maarja Öpik, Mari Moora, Martin Zobel, Mikk Espenberg, Ülo Mander, Abdul Nasir Khalid, Adriana Corrales, Ahto Agan, Aída‐M. Vasco‐Palacios, Alessandro Saitta, Andrea C. Rinaldi, Annemieke Verbeken, Bobby P. Sulistyo, Boris Tamgnoue, Brendan Furneaux, Camila Duarte Ritter, Casper Nyamukondiwa, Cathy Sharp, César Marín, Daniyal Gohar, Dārta Kļaviņa, Dipon Sharmah, Dong Dai, Eduardo Nouhra, Elisabeth M. Biersma, Elisabeth Rähn, Erin K. Cameron, Eske De Crop, Eveli Otsing, Evgeny A. Давыдов, Felipe E. Albornoz, Francis Q. Brearley, Franz Buegger, Geoffrey Zahn, Gregory Bonito, Inga Hiiesalu, Isabel C. Barrio, Jacob Heilmann‐Clausen, Jelena Ankuda, John Y. Kupagme, Jose G. Maciá‐Vicente, Joseph Djeugap Fovo, József Geml, Juha M. Alatalo, Julieta Alvarez‐Manjarrez, Kadri Põldmaa, Kadri Runnel, Kalev Adamson, Kari Anne Bråthen, Karin Pritsch, Kassim I. Tchan, Kęstutis Armolaitis, Kevin D. Hyde, Kevin K. Newsham, Kristel Panksep, Adebola Azeez Lateef, Liis Tiirmann, Linda Hansson, Louis J. Lamit, Malka Saba, Maria Tuomi, Marieka Gryzenhout, Marijn Bauters, Meike Piepenbring, Nalin N. Wijayawardene, Nourou S. Yorou, Olavi Kurina, Peter E. Mortimer, Peter Meidl, Petr Kohout, Rasmus Puusepp, Rein Drenkhan, Roberto Garibay‐Orijel, Roberto Godoy, Saad Alkahtani, Saleh Rahimlou, Sergey V. Dudov, Sergei Põlme, Soumya Ghosh, Sunil Mundra, Talaat Ahmed, Tarquin Netherway, Terry W. Henkel, Tomas Roslin, Vincent Nteziryayo, Vladimir E. Fedosov, V. G. Onipchenko, W. A. Erandi Yasanthika, Young Woon Lim, Nadejda A. Soudzilovskaia, Alexandre Antonelli, Urmas Kõljalg, Kessy Abarenkov

Bibliographic record

VenueGlobal Change Biology · 2022
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMycorrhizal Fungi and Plant Interactions
Canadian institutionsSaint Mary's University
FundersNovo Nordisk FondenNatural Environment Research CouncilSight Research UK
KeywordsWetlandEcologyGeographyEcosystemBiologyWoodlandHabitatBiodiversitySpecies richnessAgroforestry

Abstract

fetched live from OpenAlex

Fungi are highly diverse organisms, which provide multiple ecosystem services. However, compared with charismatic animals and plants, the distribution patterns and conservation needs of fungi have been little explored. Here, we examined endemicity patterns, global change vulnerability and conservation priority areas for functional groups of soil fungi based on six global surveys using a high-resolution, long-read metabarcoding approach. We found that the endemicity of all fungi and most functional groups peaks in tropical habitats, including Amazonia, Yucatan, West-Central Africa, Sri Lanka, and New Caledonia, with a negligible island effect compared with plants and animals. We also found that fungi are predominantly vulnerable to drought, heat and land-cover change, particularly in dry tropical regions with high human population density. Fungal conservation areas of highest priority include herbaceous wetlands, tropical forests, and woodlands. We stress that more attention should be focused on the conservation of fungi, especially root symbiotic arbuscular mycorrhizal and ectomycorrhizal fungi in tropical regions as well as unicellular early-diverging groups and macrofungi in general. Given the low overlap between the endemicity of fungi and macroorganisms, but high conservation needs in both groups, detailed analyses on distribution and conservation requirements are warranted for other microorganisms and soil organisms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.021
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.263
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations145
Published2022
Admission routes1
Has abstractyes

Explore more

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