MétaCan
Menu
Back to cohort
Record W4292696011 · doi:10.1002/mds.29164

Common Variants Near <scp>ZIC1</scp> and <scp>ZIC4</scp> in Autopsy‐Confirmed Multiple System Atrophy

2022· article· en· W4292696011 on OpenAlexaff
Franziska Hopfner, Anja Tietz, Viktoria Ruf, Owen A. Ross, Shunsuke Koga, Dennis W. Dickson, Adriano Aguzzi, Johannes Attems, Thomas Beach, Allison Beller, William P. Cheshire, Vivianna M. Van Deerlin, Paula Desplats, Günther Deuschl, Charles Duyckaerts, David Ellinghaus, Valentin Evsyukov, Margaret E. Flanagan, André Franke, Matthew P. Frosch, Marla Gearing, Ellen Gelpí, Jay A. van Gerpen, Bernardino Ghetti, Jonathan D. Glass, Lea T. Grinberg, Glenda M. Halliday, Ingo Helbig, Matthias Höllerhage, Inge Huitinga, David J. Irwin, Dirk Keene, Gábor G. Kovács, Edward B. Lee, Johannes Levin, Marı́a José Martı́, Ian R. Mackenzie, Ian G. McKeith, Catriona McLean, Brit Mollenhauer, Manuela Neumann, Kathy L. Newell, Alexander Pantelyat, Manuela Pendziwiat, Annette Peters, Laura Molina‐Porcel, Alberto Rábano, Radoslav Matěj, Alex Rajput, Ali H. Rajput, Regina Reimann, William K. Scott, William W. Seeley, Sashika Selvackadunco, Tanya Simuni, Christine Stadelmann, Per Svenningsson, Alan Thomas, Claudia Trenkwalder, Claire Troakes, John Q. Trojanowski, Ryan J. Uitti, Charles L. White, Zbigniew K. Wszołek, Tao Xie, Teresa Ximelis, Justo Yebenes, Ulrich Müller, Jochen Herms, Gregor Kuhlenbäumer, Günter U. Höglinger

Bibliographic record

VenueMovement Disorders · 2022
Typearticle
Languageen
FieldMedicine
TopicAmyotrophic Lateral Sclerosis Research
Canadian institutionsUniversity of SaskatchewanRoyal University HospitalSaskatchewan Health AuthorityOntario Brain InstituteVancouver General HospitalOccupational Cancer Research CentreSaskatchewan HealthUniversity Health NetworkUniversity of TorontoUniversity of British Columbia
FundersNational Institute on AgingPerelman School of Medicine, University of PennsylvaniaNational Institutes of HealthElse Kröner-Fresenius-StiftungDeutsche ForschungsgemeinschaftAlzheimer's SocietyE-RareMedical Research CouncilMayo ClinicDeutsche Gesellschaft für Parkinson und BewegungsstörungenKing's College LondonUniversity of WashingtonCurePSPUniversity of PennsylvaniaNational Alzheimer's Coordinating CenterVolkswagen FoundationAmerican Parkinson Disease AssociationNational Institute of Neurological Disorders and StrokeHelmholtz Zentrum MünchenBundesministerium für Bildung und ForschungNancy and Buster Alvord Endowment
KeywordsOlivopontocerebellar atrophyAtrophyPathologyCerebellar ataxiaCerebellumParkinsonismAtaxiaBiologyDegenerative diseaseMedicineEndocrinologyNeuroscienceDisease

Abstract

fetched live from OpenAlex

BACKGROUND: Multiple System Atrophy is a rare neurodegenerative disease with alpha-synuclein aggregation in glial cytoplasmic inclusions and either predominant olivopontocerebellar atrophy or striatonigral degeneration, leading to dysautonomia, parkinsonism, and cerebellar ataxia. One prior genome-wide association study in mainly clinically diagnosed patients with Multiple System Atrophy failed to identify genetic variants predisposing for the disease. OBJECTIVE: Since the clinical diagnosis of Multiple System Atrophy yields a high rate of misdiagnosis when compared to the neuropathological gold standard, we studied only autopsy-confirmed cases. METHODS: We studied common genetic variations in Multiple System Atrophy cases (N = 731) and controls (N = 2898). RESULTS: , all of which were supported by at least one additional genotyped and several imputed single nucleotide polymorphisms. The genes closest to the chromosome 3 locus are ZIC1 and ZIC4 encoding the zinc finger proteins of cerebellum 1 and 4 (ZIC1 and ZIC4). INTERPRETATION: Since mutations of ZIC1 and ZIC4 and paraneoplastic autoantibodies directed against ZIC4 are associated with severe cerebellar dysfunction, we conducted immunohistochemical analyses in brain tissue of the frontal cortex and the cerebellum from 24 Multiple System Atrophy patients. Strong immunohistochemical expression of ZIC4 was detected in a subset of neurons of the dentate nucleus in all healthy controls and in patients with striatonigral degeneration, whereas ZIC4-immunoreactive neurons were significantly reduced inpatients with olivopontocerebellar atrophy. These findings point to a potential ZIC4-mediated vulnerability of neurons in Multiple System Atrophy. © 2022 The Authors. Movement Disorders published by Wiley Periodicals LLC on behalf of International Parkinson and Movement Disorder Society.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.034
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.249
Teacher spread0.235 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2022
Admission routes1
Has abstractyes

Explore more

Same venueMovement DisordersSame topicAmyotrophic Lateral Sclerosis ResearchFrench-language works237,207