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Data-Efficient Training of Pure Vision Transformers for the Task of Chest X-ray Abnormality Detection Using Knowledge Distillation

2022· article· en· W4294975107 on OpenAlexafffund
Seyed Ali Jalalifar, Ali Sadeghi‐Naini

Bibliographic record

Venue2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) · 2022
Typearticle
Languageen
FieldMedicine
TopicCOVID-19 diagnosis using AI
Canadian institutionsHealth Sciences CentreSunnybrook Health Science CentreYork University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsComputer scienceTransformerConvolutional neural networkAbnormalityArtificial intelligenceLimitingMachine learningTraining setPattern recognition (psychology)VoltageEngineeringElectrical engineering

Abstract

fetched live from OpenAlex

It is generally believed that vision transformers (ViTs) require a huge amount of data to generalize well, which limits their adoption. The introduction of data-efficient algorithms such as data-efficient image transformers (DeiT) provided an opportunity to explore the application of ViTs in medical imaging, where data scarcity is a limiting factor. In this work, we investigated the possibility of using pure transformers for the task of chest x-ray abnormality detection on a small dataset. Our proposed framework is built on a DeiT structure benefiting from a teacher-student scheme for training, with a DenseNet with strong classification performance as the teacher and an adapted ViT as the student. The results show that the performance of transformers is on par with that of convolutional neural networks (CNNs). We achieved a test accuracy of 92.2% for the task of classifying chest x-ray images (normal/pneumonia/COVID-19) on a carefully selected dataset using pure transformers. The results show the capability of transformers to accompany or replace CNNs for achieving state-of-the-art in medical imaging applications. The code and models of this work are available at https://github.com/Ouantimb-Lab/DeiTCovid.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.361
Threshold uncertainty score0.504

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.113
GPT teacher head0.381
Teacher spread0.267 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2022
Admission routes2
Has abstractyes

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