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Record W4297184479 · doi:10.1186/s13213-022-01696-2

Impact of Litsea cubeba inter-row cover on the structure of bacterial community in the tea plantation

2022· article· en· W4297184479 on OpenAlexfundno aff
Haiping Hao, Fei Xia, Hongtong Bai, Xunyou Yan, Hongxia Cui, Xiaoming Xie, Lei Shi

Bibliographic record

VenueAnnals of Microbiology · 2022
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant-Microbe Interactions and Immunity
Canadian institutionsnot available
FundersInstitute of Botany, Chinese Academy of SciencesAgriculture and Agri-Food CanadaKey Technology Research and Development Program of Shandong
KeywordsAcidobacteriaMicrobial population biologyRelative species abundanceChemistryAgronomyProteobacteriaBiologyAbundance (ecology)16S ribosomal RNABacteriaEcology

Abstract

fetched live from OpenAlex

Abstract Purpose The application of bio-control plants in the agricultural processes is one of the effective ways to solve the traditional agricultural synthetic pesticide residues. This study will investigate the effect of bio-control plant Litsea cubeba branch inter-row cover on soil bacterial community, soil-enriched metabolites, and soil mineral nutrition in tea plantation, which will provide a basis for the use of bio-control plant in agroecological farming systems. Methods The fruit-bearing (F-Pr) and vegetative (F-Ab) branches of Litsea cubeba were inter-row covered (the use of plants for partial coverage of soil between the rows) in the tea plantation. And we determined the soil microbial community, soil mineral nutriment, and soil-enriched metabolites composition with the methods of 16S rRNA gene sequencing, inductively coupled plasma-atomic emission spectroscopy (ICP-AEC), inductively coupled plasma-optical emission spectrometry (ICP-OES), and gas chromatography-mass spectrometry (GS-MS). We also predict the function of soil bacteria with the Tax4Fun software. Results Litsea cubeba inter-row cover modified the soil microbial structure and diversity; Litsea cubeba inter-row cover significantly decreased the relative abundance of Acidobacteria, Chloroflexi, and Planctomycetes while increased the relative abundance of Proteobacteria. Litsea cubeba inter-row cover significantly antagonized the plant pathogen community, and its OTUs number decreased from 907 ± 81 in the control to 337 ± 25 in F-Pr treatment; compared with F-Pr treatment, F-Ab treatment had weaker effect on the abundance of nutrition metabolism and transport, carbohydrate utilization, and nitrate reduction A. The aluminum element in the F-Pr treatment was significantly reduced, while phosphorus was increased. The soil-enriched metabolites of F-Pr treatment contained some antibacterial substance, including 14.2 ± 3.32% citronellol, 10.38 ± 4.79% alpha-terpineol, and 8.25 ± 2.62% (+)-2-bornanone, which was the main environment factor that affects the soil bacterial structure and diversity. Conclusion Litsea cubeba inter-row cover significantly affected bacterial structure and diversity, slightly increased the soil pH, and improved soil aluminum and phosphorus status; soil-enriched metabolites were the major environment factor affecting soil bacterial community and should be considered in the application of bio-control plants; Litsea cubeba vegetative branch inter-row cover will be a feasible measure for integrated pest management in tea plantation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.051
GPT teacher head0.292
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2022
Admission routes1
Has abstractyes

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