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Record W4298004383 · doi:10.26434/chemrxiv-2022-zjkjw

Disclosing Environmental Ligands of hL-FABP and PPARγ: Should We Re-evaluate the Chemical Safety of Hydrocarbon Surfactants?

2022· preprint· en· W4298004383 on OpenAlexafffund
Yufeng Gong, Diwen Yang, Jia‐Bao Liu, Holly Barrett, Jianxian Sun, Hui Peng

Bibliographic record

VenueChemRxiv · 2022
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPeroxisome Proliferator-Activated Receptors
Canadian institutionsUniversity of Toronto
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsHydrocarbonChemistryPeroxisomeFatty acid-binding proteinEnvironmental chemistryPeroxisome proliferator-activated receptorBiochemistryOrganic chemistryReceptorGene

Abstract

fetched live from OpenAlex

Environmental obesogens can cause adverse health effects through activation of peroxisome proliferator-activated nuclear receptor γ (PPARγ). However, only a small portion of PPARγ ligands in the environment have been discovered to date, due to the co-occurrence of thousands of compounds. In this study, protein Affinity Purification with Nontargeted Analysis (APNA) was employed to identify ligands of human liver fatty acid binding protein (hL-FABP) and PPARγ in indoor dust and sewage sludge. A total of 84 features were “pulled out” by His-tagged hL-FABP as putative ligands, among which 13 were assigned as fatty acids and hydrocarbon surfactants. The binding of hydrocarbon surfactants to hL-FABP/PPARγ was confirmed using both recombinant proteins and reporter cells. These hydrocarbon surfactants, along with >50 homologues and isomers, were detected in dust and sludge at high concentrations. Fatty acids and hydrocarbon surfactants explained the majority of hL-FABP (57.7 ± 32.9%) and PPARγ (66.0 ± 27.1%) activities in the sludge. Notably, hydrocarbon surfactants contributed to PPARγ activities at comparable or even higher levels than fatty acids, with alkylbenzene sulfonates being the predominant PPARγ ligands in sludge. This study revealed hydrocarbon surfactants as the predominant synthetic ligands of hL-FABP/PPARγ, highlighting the importance of re-evaluating their chemical safety as putative obesogens.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.263
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2022
Admission routes2
Has abstractyes

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