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Record W4300066072 · doi:10.17615/ka8q-bk87

Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease

2020· article· en· W4300066072 on OpenAlexfundno aff
Mufassra Naz, Corrado Priami, Jimit Doshi, Roland Krause, Aristeidis Sotiras, Lara M. Mangravite, Gustavo Stolovitzky, Veronica Y. Sabelnykova, Elias Chaibub Neto, Yen‐Jen Oyang, Mingyi Hong, Shanfeng Zhu, Manjari Narayan, Benjamin A. Logsdon, Michael W. Weiner, Simon Lovestone, Catalina Anghel, Yi‐An Tung, Guanghua Xiao, Anandhi Iyappan, Jessica Gan, Donna N. Dillenberger, Arno Klein, John Kauwe, Andrea Tateo, Andrew Simmons, Yuanfang Guan, R. Bellotti, David A. Bennett, Ting‐Ying Chien, Emilie Lalonde, Beibei Chen, Sabina Tangaro, Enrico Glaab, Denise Duma, Christos Davatzikos, Jinseub Hwang, Sudeshna Das, David W. Fardo, Tsung‐Wei Ma, Paul C. Boutros, Holger Fröhlich, Yuriko Katsumata, Jia Xu, Hojin Yang, Chao Huang, Hongtu Zhu, Tim Clark, Xihui Lin, Genevera I. Allen, Eunjee Lee, Joseph G. Ibrahim, Ramil Nurtdinov, Julie Livingstone, Stephen Friend, Yudi Pawitan, Peter St George‐Hyslop, Rosangela Errico, Kevin L. Boehme, Güray Erus, Lei Xie, Nicola Amoroso, Fan Zhu, Jieyao Deng, Robert C. Green, Zhandong Liu, Philipp Senger, Christopher J. Bare, Cristian Caloian, Xiaowei Zhan, Shengwen Peng, Taylor J. Maxwell, Paurush Praveen, Satrajit Ghosh, Aishwarya Alex Namasivayam, Ashutosh Malhotra, Mario Lauria, Richard Dobson, Evan Everett, Laura Caberlotto, Erdem Varol, Zhou Yunyun, John Nagorski, F C Campbell, Stephen Piccolo, Yang Xie, Paolo Inglese, Derek Beaton, Chien‐Yu Chen, Yu‐Chuan Chang, Thea Norman, George Vradenburg, Qilin Dong, E.T. Merrill, Venkatachalapathy S. K. Balagurusamy, Nicholas J. Tustison, Xia Shen, Stephen Newhouse, Qijia Jiang, Mette A. Peters

Bibliographic record

VenueUNC Libraries · 2020
Typearticle
Languageen
FieldPsychology
TopicMental Health Research Topics
Canadian institutionsnot available
FundersNational Institute on AgingCanadian Institutes of Health ResearchUniversity of California, San FranciscoUniversity of California, San DiegoGenentechNational Institutes of HealthIXICOServierEisaiNorthern California Institute for Research and EducationRush UniversityUniversity of WashingtonPfizerBiogenBioClinicaMcGill UniversityTakeda Pharmaceuticals U.S.A.SanofiSynarcUniversity of Southern CaliforniaEuropean Federation of Pharmaceutical Industries and AssociationsMedpaceAlzheimer's Disease Neuroimaging InitiativeMeso Scale DiagnosticsAlzheimer's AssociationBrightFocus FoundationEli Lilly and CompanyBristol-Myers SquibbNovartis Pharmaceuticals Corporation
KeywordsCognitive declineResilience (materials science)DiseaseEstimationCognitionCognitive agingAlzheimer's diseasePsychological resiliencePsychologyGerontologyCognitive psychologyDementiaMedicineNeuroscienceInternal medicineEconomicsSocial psychology

Abstract

fetched live from OpenAlex

Identifying accurate biomarkers of cognitive decline is essential for advancing early diagnosis and prevention therapies in Alzheimer’s Disease. The Alzheimer’s Disease DREAM Challenge was designed as a computational crowdsourced project to benchmark the current state-of-the-art in predicting cognitive outcomes in Alzheimer’s Disease based on high-dimensional, publicly available genetic and structural imaging data. This meta-analysis failed to identify a meaningful predictor developed from either data modality, suggesting that alternate approaches should be considered for to prediction of cognitive performance.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.021
metaresearch head score (Gemma)0.084
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.021
Threshold uncertainty score0.112

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0210.084
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0020.002
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0020.003
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.078
GPT teacher head0.388
Teacher spread0.310 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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Same venueUNC Libraries→Same topicMental Health Research Topics→French-language works237,207→