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Record W4300534326 · doi:10.17615/y5gv-3561

Genetically predicted longer telomere length is associated with increased risk of B-cell lymphoma subtypes

2020· article· en· W4300534326 on OpenAlexfundno aff
Richard K. Severson, Anneclaire J. De Roos, Brian K. Link, Anne J. Novak, Yuanqing Ye, Mitchell J. Machiela, Nathaniel Rothman, Corinne Haïoun, Sonja I. Berndt, Wendy Cozen, Karin E. Smedby, Marc Maynadié, Martha Glenn, Patricia Hartge, Mark P. Purdue, Eve Roman, Robert J. Klein, Nicola J. Camp, Sophia Wang, Anthony Staines, Jacqueline Clavel, Anne Tjønneland, Carrie A. Thompson, John J. Spinelli, Göran Roos, Paolo Vineis, Alex Smith, Alexandra Nieters, Jarmo Virtamo, Edward Giovannucci, Bengt Glimelius, Thomas E. Witzig, Susan L. Slager, Anne Zeleniuch‐Jacquotte, Charles C. Chung, Qing Lan, Yolanda Benavente, James R. Cerhan, Meredith Yeager, Elizabeth A. Holly, Lauren R. Teras, Paul I. W. de Bakker, Lucía Conde, Henrik Hjalgrim, Melissa C. Southey, Jinyan Huang, Baoshan Ma, Tracy Lightfoot, Theodore R. Holford, Emanuele Angelucci, Graham G. Giles, Hervé Ghesquières, Claire M. Vajdic, Stephen J. Chanock, Zhaoming Wang, David G. Cox, Yan W. Asmann, Lisa Cannon‐Albright, Gilles Salles, W. Ryan Diver, Thomas M. Habermann, Hervé Tilly, Rudolph Kaaks, Paige M. Bracci, Charles R. Lawrence, Eleanor Kane, Joseph Vijai, Lenka Foretová, Kenneth Offit, Joseph F. Fraumeni, Martyn T. Smith, Angela Brooks‐Wilson, Nikolaus Becker, Yawei Zhang, Roel Vermeulen, Jennifer Turner, Peter Kraft, Hans‐Olov Adami, Degui Zhi, Stephanie J. Weinstein, Stephen M. Ansell, Jian Gu, Brian C.‐H. Chiu, Thierry Jo Molina, Kari E. North, Mark Liebow, Lindsay M. Morton, Alain Monnereau, Elio Ríboli, Rebecca D. Jackson, Simonetta Di Lollo, Lesley F. Tinker, Kimberly A. Bertrand, Mariagrazia Zucca, Immaculata De Vivo, Paul Brennan, Demetrius Albanes, Karen Curtin, Paolo Boffetta, James McKay, Christopher R. Flowers, Sílvia de Sanjosé, Laurie Burdett, Jacques Riby, Heiner Boeing, Dennis D. Weisenburger, Xifeng Wu, Christine F. Skibola, Rachel S. Kelly, Simon Crouch, Tongzhang Zheng, Amy Hutchinson, Mads Melbye, Ju-Hyun Park, Marco Rais, Andrew D. Zelenetz, Ahmet Doǧan, Liming Liang, Danylo Villano, Brenda M. Birmann

Bibliographic record

VenueUNC Libraries · 2020
Typearticle
Languageen
FieldMedicine
TopicTelomeres, Telomerase, and Senescence
Canadian institutionsnot available
FundersNational Heart, Lung, and Blood InstituteCancer Council NSWMedical Research CouncilCenters for Disease Control and PreventionNational Institutes of HealthAgence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du TravailNational Health and Medical Research CouncilInstitut National Du CancerRegione Autonoma della SardegnaAssociazione Italiana per la Ricerca sul CancroStockholms Läns LandstingFondation de FranceGeneralitat de CatalunyaCanadian Institutes of Health ResearchCancerfondenBundesministerium für Bildung und ForschungUniversity of Southern CaliforniaCancer Research UKUniversity of SydneyUniversity at BuffaloCompagnia di San PaoloEuropean CommissionUniversity of California, San FranciscoMichael Smith Health Research BCDivision of Cancer Prevention, National Cancer InstituteHealth Research BoardU.S. Department of Health and Human ServicesNational Cancer Research InstituteUniversity of Texas MD Anderson Cancer CenterLeukemia and Lymphoma ResearchUniversity of PittsburghHuntsman Cancer InstituteMedStar Health Research InstituteJosé Carreras Leukämie-StiftungUniversity of UtahNational Cancer InstituteWake Forest UniversityMemorial Sloan-Kettering Cancer CenterKarolinska InstitutetUtah State UniversityCancer Council VictoriaU.S. Department of Veterans AffairsYale UniversityUtah Department of HealthBrigham and Women's HospitalBundesamt für StrahlenschutzOhio State University
KeywordsTelomereBiologyGeneticsLymphomaCancer researchMedicineInternal medicineDNAImmunology

Abstract

fetched live from OpenAlex

Evidence from a small number of studies suggests that longer telomere length measured in peripheral leukocytes is associated with an increased risk of non-Hodgkin lymphoma (NHL). However, these studies may be biased by reverse causation, confounded by unmeasured environmental exposures and might miss time points for which prospective telomere measurement would best reveal a relationship between telomere length and NHL risk. We performed an analysis of genetically inferred telomere length and NHL risk in a study of 10 102 NHL cases of the four most common B-cell histologic types and 9562 controls using a genetic risk score (GRS) comprising nine telomere length-associated single-nucleotide polymorphisms. This approach uses existing genotype data and estimates telomere length by weighing the number of telomere length-associated variant alleles an individual carries with the published change in kb of telomere length. The analysis of the telomere length GRS resulted in an association between longer telomere length and increased NHL risk [four B-cell histologic types combined; odds ratio (OR) = 1.49, 95% CI 1.22–1.82, P-value = 8.5 × 10−5]. Subtype-specific analyses indicated that chronic lymphocytic leukemia or small lymphocytic lymphoma (CLL/SLL) was the principal NHL subtype contributing to this association (OR = 2.60, 95% CI 1.93–3.51, P-value = 4.0 × 10−10). Significant interactions were observed across strata of sex for CLL/SLL and marginal zone lymphoma subtypes as well as age for the follicular lymphoma subtype. Our results indicate that a genetic background that favors longer telomere length may increase NHL risk, particularly risk of CLL/SLL, and are consistent with earlier studies relating longer telomere length with increased NHL risk.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.192
Teacher spread0.180 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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