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Record W4303418841 · doi:10.3389/fmars.2022.939239

Testing the hypoxia tolerance and hypoxic performance of fishes: A two-tier screening approach

2022· article· en· W4303418841 on OpenAlexafffund
Yangfan Zhang, Anthony P. Farrell

Bibliographic record

VenueFrontiers in Marine Science · 2022
Typearticle
Languageen
FieldEnvironmental Science
TopicPhysiological and biochemical adaptations
Canadian institutionsUniversity of British Columbia
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsHypoxia (environmental)Robustness (evolution)Computer scienceEnvironmental resource managementEcologyBiologyFisheryEnvironmental scienceOxygenChemistryGene

Abstract

fetched live from OpenAlex

With regional hypoxic episodes in the world’s oceans becoming more severe and more frequent, a valuable management need will be a screening protocol to characterize the full diversity of hypoxic robustness among fishes (defined here as their tolerance and performance). Yet, high-throughput screening protocols to deal with the almost 33,000 fish species have the potential to trade off convenience with the information depth normally provided with comprehensive but more time-consuming phenotyping protocols. As a solution, we propose a two-tier testing approach, one that combines a simple, rapid, cost-effective, and well-established hypoxia challenge test (a measure of hypoxic tolerance) with an individual-based hypoxic performance test that defines maximum aerobic capacity over a wide range of ambient water oxygen levels (a hypoxic performance curve). The later test would be performed on selected indicator species identified from the tolerance screening test. Here we describe the two methodological approaches for this two-tier approach using some existing data to illustrate the potential for their applications in marine science.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.151
Threshold uncertainty score0.444

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.201
Teacher spread0.183 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2022
Admission routes2
Has abstractyes

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